Publications

We prioritise quality above quantity in scientific publications, by investing on generating large data sets and performing robust analyses to tackle outstanding problems.

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restez: Create and Query a Local Copy of GenBank in R Bennett, D.J., Hettling, H., Silvestro, D., Vos, R., Antonelli, A. Methods and Tools Journal of Open Source Software Research article 2018 Link Bennett, D.J., Silvestro, D., Antonelli, A.
Shark and ray diversity in the Tropical America (Neotropics)—an examination of environmental and historical factors affecting diversity Carrillo-Briceño, J.D., Carrillo, J.D., Aguilera, O.A., Sánchez-Villagra, M.R. Neotropics, Biogeography, Palaeontology, Animals PeerJ Research article 2018 Link Carrillo, J.D.
phylotaR: An Automated Pipeline for Retrieving Orthologous DNA Sequences from GenBank in R Bennett, D.J., Hettling, H., Silvestro, D., Zizka, A., Bacon, C.D., Faurby, S., Vos, R.A., Antonelli, A. Methods and Tools Life Research article 2018 Link Bennett, D.J., Silvestro, D., Bacon, C.D., Faurby, S., Antonelli, A.
Amazonia is the primary source of Neotropical biodiversity Antonelli, A., Zizka, A., Carvalho, F.A., Scharn, R., Bacon, C.D., Silvestro, D., Condamine, F.L. Biogeography, Neotropics, Plants, Animals, Methods and Tools Proceedings of the National Academy of Sciences of the USA Research article 2018 Link Antonelli, A., Bacon, C.D., Silvestro, D.
Allele phasing greatly improves the phylogenetic utility of Ultraconserved Elements. Andermann, T., Fernandes, A., Olsson, U., Töpel, M., Pfeil, B., Oxelman, B., Aleixo, A., Faircloth, B.C., Antonelli, A. Methods and Tools, Systematics, Animals, Neotropics Systematic Biology Research article 2018 Link Andermann, T., Antonelli, A.
Biodiversity seen through the perspective of insects: 10 simple rules on methodological choices, common challenges, and experimental design for genomic studies. Matos-Maraví, P., Duarte Ritter, C., Barnes, C., Nielsen, M., Olsson, U., Wahlberg, N., Marquina, D., Sääksjärvi, I., Antonelli, A. Animals, Methods and Tools, Systematics PeerJ Research article 2018 Link Matos-Maraví, P., Antonelli, A.
Mining threatens Colombian ecosystems. Pérez-Escobar, O.A., Cámara-Leret, R., Antonelli, A., Bateman, R., Bellot, S., Chomicki, G., Cleef, A., Diazgranados, M., Dodsworth, S., Jaramillo, C., Madriñan, S., Olivares, I., Zuluaga, A., Bernal, R. Neotropics Science Overview article 2018 Link Antonelli, A.
Teasing apart mountain uplift, climate change and biotic drivers of species diversification. Condamine, F.L., Antonelli, A., Lagomarsino, L.P., Hoorn, C., Liow, L.H. Methods and Tools, Biogeography, Animals, Neotropics Mountains, Climate and Biodiversity Book chapter 2018 Link Antonelli, A.
The road to evolutionary success: insights from the demographichistory of an Amazonian palm. Melo, W.A., Freitas, C.G., Bacon, C.D., Collevatti, R.G. Plants, Biogeography, Systematics, Neotropics Heredity Research article 2018 Link Bacon, C.D.
Ytre Hvaler nasjonalpark Stronen, A.V., Iacolina, L., Pertoldi, C., Kusza, S., Hulva, P., Dykyy, I., Kojola, I., Faurby, S. Animals, Methods and Tools, Systematics Conservation Genetics Resources Research article 2018 Link Faurby, S.
The impact of early Quaternary climate change on the diversification and population dynamics of a South American cactus species. Silva, G.A.R., Antonelli, A., Lendel A., Moraes, E.M., Manfrin, M.H. Biogeography, Plants, Neotropics, Systematics Journal of Biogeography Research article 2018 Link Antonelli, A.
Mountains, Climate and Biodiversity. Hoorn, C., Perrigo, A., Antonelli, A. Biogeography, Global, Animals, Plants, Palaeontology, Methods and Tools Wiley Book 2018 Link Perrigo, A., Antonelli, A.
The science and ethics of extinction. Antonelli, A., Perrigo, A. Global Nature Ecology and Evolution Overview article 2018 Link Antonelli, A., Perrigo, A.
Mountains of diversity. Zizka, A., Antonelli, A. Global, Biogeography, Animals Nature Overview article 2018 Link Antonelli, A.
The pitfalls of taking science to the public. Antonelli, A., Perrigo, A. Global Science Overview article 2018 Link Antonelli, A., Perrigo, A.
Anthropogenic range contractions bias species climate change forecasts. Faurby, S., Araújo, M.B. Methods and Tools, Animals, Global Nature Climate Change Research article 2018 Link Faurby, S.
The impact of endothermy on the climatic niche evolution and the distribution of vertebrate diversity. Rolland, J., Silvestro, D., Schluter, D., Guisan, A., Broennimann, O., Salamin, N. Biogeography, Animals, Global Nature Ecology and Evolution Research article 2018 Link Silvestro, D.
Allele phasing is critical to revealing a shared allopolyploid origin of Medicago arborea and M. strasseri (Fabaceae). Eriksson, J.S., de Sousa, F., Bertrand, Y.J.K., Antonelli, A., Oxelman, B., Pfeil, B.E. Plants, Systematics, Methods and Tools, Temperate zone BMC Evolutionary Biology Research article 2018 Link Eriksson, J.S., Antonelli, A.
Patterns, biases and prospects in the distribution and diversity of Neotropical snakes. Guedes, T.B., Sawaya, R.J., Zizka, A., Laffan, S., Faurby, S., Pyron, R.A., Bérnils, R.S., Jansen, M., Passos, P., Prudente, A.L.C., Cisneros-Heredia, D.F., Braz, H.B., Nogueira, C.C., Antonelli, A. Animals, Neotropics, Biogeography Global Ecology and Biogeography Research article 2018 Link Guedes, T.B., Faurby, S., Antonelli, A.
Learning from the past to prepare for the future: Felids face continued threat from declining prey richness. Sandom, C.J., Faurby, S., Svenning, J.C., Burnham, D., Dickman, A., Hinks, A., Macdonald, E.A., Ripple, B., Williams, J., Macdonald, D. Biogeography, Animals Ecography Research article 2018 Link Faurby, S.
Clownfishes evolution below and above the species level. Rolland, J., Silvestro, D., Litsios, G., Faye, L., Salamin, N. Biogeography, Animals Proceedings of the Royal Society Research article 2018 Link Silvestro, D.
An ant genus-group (Prenolepis) illuminates the biogeography and drivers of insect diversification in the Indo-Pacific. Matos-Maraví, P., Clouse, R.M., Sarnat, E.M., Economo, E.P., LaPolla, J.S., Borovanska, M., Rabeling, C., Czekanski-Moir, J., Latumahina, F., Wilson, E.O., Janda, M. Biogeography, Animals, Palaeotropics Molecular Phylogenetics and Evolution Research article 2018 Link Matos-Maraví, P.
Evolution of the sabertooth mandible: A deadly ecomorphological specialization. Piras, P., Silvestro, D., Carotenuto, F., Castiglione, S., Kotsakis, A., Maiorino, L., Melchionna, M., Mondanaro, A., Sansalone, G., Serio, C., Vero, V.A., Raia, P. Biogeography, Animals Palaeogeography, Palaeoclimatology, Palaeoecology Research article 2018 Link Silvestro, D.
Evolutionary persistence in Gunnera and the contribution of southern plant groups to the tropical Andes biodiversity hotspot. Bacon, C.D., Velásquez-Puentes, F.J., Hinojosa, L.F., Schwartz, T., Oxelman, B., Pfeil, B., Arroyo, M.T.K., Wanntorp, L., Antonelli, A. Biogeography, Plants, Neotropics, Systematics PeerJ Research article 2018 Link Bacon, C.D., Antonelli, A.
New species of Mongrel Frogs (Pyxicephalidae: Nothophryne) for northern Mozambique inselbergs. Conradie, W., Bittencourt-Silva, G.B., Farooq, H.M., Loader, S.P., Menegon, M., Tolley, K.A. Systematics, Animals, Africa African Journal of Herpetology Research article 2018 Link Farooq, H.M.
A roadmap for global synthesis of the plant tree of life Eiserhardt, W.L., Antonelli, A., Bennett, D.J., Botigué, L.R., Burleigh, J.G., Dodsworth, S., Enquist, B.J., Forest, F., Kim, J.T., Kozlov, A.M., Leitch, I.J., Maitner, B.S., Mirarab, S., Piel, W.H., Pérez‐Escobar, O.A., Pokorny, L., Rahbek, C., Sandel, B., Smith, S.A., Stamatakis, A., Vos, R.A., Warnow, T., Baker, W.J. Systematics, Methods and Tools American journal of botany Research article 2018 Link Antonelli, A., Bennett, D.J.
We must protect biodiversity. Antonelli, A., Perrigo, A. Global Washington Post Popular science 2017 Link Antonelli, A., Perrigo, A.
Prehistoric and historic baselines for trophic rewilding in the Neotropics. Svenning, J.C., Faurby, S. Animals, Neotropics, Ecology Perspectives in Ecology and Conservation Research article 2017 Link Faurby, S.
Frugivory-related traits promote speciation of tropical palms. Onstein, R.E., Baker, W.J., Couvreur, T.L.P., Faurby, S., Svenning, J.C. Neotropics, Plants, Ecology Nature Ecology and Evolution Research article 2017 Link Faurby, S.
Description of a new flat gecko (Squamata: Gekkonidae: Afroedura) from Mount Gorongosa, Mozambique. Branch, W.R., Guyton, J.A., Schmitz, A., Barej, M.F., Naskrecki, P., Farooq, H.M., Verburgt, L., Rödel, M.O. Animals, Africa, Systematics Zootaxa Research article 2017 Link Farooq, H.M.
Comparative biogeography, big data, and common myths. Antonelli, A. Biogeography, Methods and Tools, Global Tropical Plant Collections: Legacies from the Past? Essential Tools for the Future? Book chapter 2017 PDF Antonelli, A.
Historical Biogeography of endemic seed plant genera in the Caribbean: did GAARlandia play a role? Nieto Blázquez, M.E., Antonelli, A., Roncal, J. Plants, Neotropics, Biogeography Ecology and Evolution Research article 2017 Link Antonelli, A.
Jagten på Kinabarken til behandling av malaria. Rønsted, N., Antonelli, A., Maldonado, C., Hansen, S.H. Neotropics, Plants, Systematics, Biogeography Aktuel Naturvidenskab Popular science 2017 Link Antonelli, A.
First record of Chomelia triflora (J.H. Kirkbr.) Delprete & Achille (Rubiaceae) from Brazil. Pessoa, M.C.R., Persson, C., Antonelli, A., Barbosa, M.R.V. Systematics, Plants, Neotropics Check List Research article 2017 Link Antonelli, A.
Comment (1) on “Formation of the Isthmus of Panama” by O’Dea et al. Jaramillo, C., Montes, C., Cardona, A., Silvestro, D., Antonelli, A., Bacon, C.D. Biogeography, Neotropics, Animals, Plants, Palaeontology Science Advances Research article 2017 Link Silvestro, D., Antonelli, A., Bacon, C.D.
Environmentally driven extinction and opportunistic origination explain fern diversification patterns. Lehtonen, S., Silvestro, D., Karger, D.N., Scotese, C., Tuomisto, H., Kessler, M., Peña, C., Wahlberg, N., Antonelli, A. Plants, Global, Palaeontology, Biogeography Scientific Reports Research article 2017 Link Silvestro, D., Antonelli, A.
The Pliocene marine megafauna extinction and its impact on functional diversity. Pimiento, C., Griffin, J.N., Clements, C.F., Silvestro, D., Varela, S., Uhen, M.D., Jaramillo, C. Animals, Neotropics, Biogeography Nature Ecology and Evolution Research article 2017 Link Silvestro, D.
Lectotypification of Pentagonia macrophylla (Rubiaceae) revisited. Rova, J., Persson, C., Ljungstrand, E., Antonelli, A. Systematics, Plants, Neotropics Phytotaxa Research article 2017 Link Antonelli, A.
Fundamental species traits explain provisioning services of tropical American palms. Cámara-Leret, R., Faurby, S., Macía, M. J., Balslev, H., Göldel, B., Svenning, J.C., Kissling, W. D., Rønsted, N., Saslis-Lagoudakis, C. H. Neotropics, Plants, Ecology Nature Plants Research article 2017 Link Faurby, S.
Shallow size-density relations within mammal clades suggest greater intra-guild ecological impact of large-bodied species. Pedersen, R.Ø., Faurby, S., Svenning, J.-C. Animals, Ecology, Biogeography Journal of Animal Ecology Research article 2017 Link Faurby, S.
Large-scale phylogenetic analysis of Amorphophallus (Araceae) derived from nuclear and plastid sequences reveals new subgeneric delineation. Claudel, C., Buerki, S., Chatrou, L.W., Antonelli, A., Alvarez, N., Hetterscheid, W. Plants, Systematics, Palaeotropics Botanical Journal of the Linnean Society Research article 2017 Link Antonelli, A.
Two new species of Pavonia (Malvoideae, Malvaceae) from southern Bahia, Brazil. Gonçalez, V.M., Pfeil, B.E., Antonelli, A., Duarte, M.C. Systematics, Plants, Neotropics Phytotaxa Research article 2017 Link Antonelli, A.
Drivers of bioregionalisation. Antonelli, A. Biogeography, Global Nature Ecology and Evolution Overview article 2017 Link Antonelli, A.
Towards a Self-Updating Platform for Estimating Rates of Speciation and Migration, Ages, and Relationships of Taxa. Antonelli, A., Hettling, H., Condamine, F.L., Vos, K., Nilsson, R. H., Sanderson, J., Sauquet, H., Scharn, R., Silvestro, D., Töpel, M., Bacon, C.D., Oxelman, B., Vos, R. A. Methods and Tools, Biogeography, Systematics Systematic Biology Research article 2017 Link Antonelli, A., Silvestro, D., Bacon, C.D.
Recent origin of Neotropical orchids in the world’s richest plant biodiversity hotspot. Perez-Escobar, O.A., Chomicki, G., Condamine, F.L., Karremans, A.P., Bogarin, D., Matzke, N., Silvestro, D., Antonelli, A. Neotropics, Plants, Biogeography, Systematics New Phytologist Research article 2017 Link Silvestro, D., Antonelli, A.
Environmental Impact Statement of biodiversity: Challenges and prospects in biologically diverse environments in Brazilian Amazonia. Duarte Ritter, C., McGrate, G., Nilsson, R.H., Fearnside, P.M., Palme, U., Antonelli, A. Neotropics, Animals, Plants, Fungi, Microorganisms, Methods and Tools Biological Conservation Research article 2017 Link Antonelli, A.
Estimating Age-Dependent Extinction: Contrasting Evidence from Fossils and Phylogenies. Hagen, O., Andermann, T., Quental, T.B., Antonelli, A., Silvestro, D. Methods and Tools, Biogeography, Palaeontology Systematic Biology Research article 2017 Link Hagen, O., Andermann, T., Antonelli, A., Silvestro, D.
Endemic palm species shed light on habitat shifts and the assembly of the Cerrado and Restinga floras. Bacon, C.D., Moraes, M., Jaramillo, C., Antonelli, A. Systematics, Biogeography, Neotropics, Plants Molecular Phylogenetics and Evolution Research article 2017 Link Bacon, C.D., Antonelli, A.
SpeciesGeoCoder: Fast categorization of species occurrences for analyses of biodiversity, biogeography, ecology and evolution. Töpel, M., Zizka, A., Calió, M.F., Scharn, R., Silvestro, D., Antonelli, A. Methods and Tools, Biogeography Systematic Biology Research article 2017 Link Silvestro, D., Antonelli, A.
Molecular phylogeny, character evolution and historical biogeography of Cryptanthus Otto & A. Dietr. (Bromeliaceae). Cruz, G.A.S., Zizka, G., Silvestro, D., Leme, E.M.C., Schulte, K., Benko-Iseppon, A.M. Plants, Systematics, Biogeography Molecular Phylogenetics and Evolution Research article 2017 Link Silvestro, D.
Cinchona anderssonii (Rubiaceae), a new overlooked species from Bolivia. Maldonado, C., Persson, C., Alban, J., Antonelli, A., Rønsted, N. Systematics, Neotropics, Plants PhytoTaxa Research article 2017 Link Antonelli, A.
Phylogeny Predicts the Quantity of Antimalarial Alkaloids Within the Iconic Yellow Cinchona Bark (Rubiaceae: Cinchona calisaya). Maldonado, C., Barnes, C.J., Cornett, C., Holmfred, E., Hansen, S.H., Persson, C., Antonelli, A., Rønsted, N. Systematics, Neotropics, Biogeography, Plants Frontiers in Plant Science Research article 2017 Link Antonelli, A.
Infomap Bioregions: Interactive mapping of biogeographical regions from species distributions Edler, D., Guedes, T., Zizka, A., Rosvall, M., Antonelli, A. Methods and Tools, Biogeography Systematic Biology Research article 2017 Link Edler, D., Guedes, T., Antonelli, A.
Cities: factor in biological impact. Antonelli, A., Perrigo, A. Global Nature Overview article 2016 Link Antonelli, A., Perrigo, A.
Finding needles in the haystack: Where to look for rare species in the American tropics? Zizka, A., ter Steege, H., Pessoa, M.C.R., Antonelli, A. Plants, Neotropics, Biogeography Ecography Research article 2016 Link Antonelli, A.
Bayesian estimation of multiple clade competition from fossil data. Silvestro, D., Pires, M.M., Quental, T.B., Salamin, N. Palaeontology, Methods and Tools Evolutionary Ecology Research Research article 2016 PDF Silvestro, D.
Tracing the Evolution and Economic Potential of Konjac Glucomannan in Amorphophallus species (Araceae) using Molecular Phylogeny and RAPD Markers. Mekkerdchoo, O., chaleeda Borompichaichartkul, C., Perrigo, A.L., Srzednicki, G., Prakitchaiwattana, C., Antonelli, A. Plants, Palaeotropics, Systematics, Methods and Tools Phytotaxa Research article 2016 Link Perrigo, A., Antonelli, A.
The Neogene rise of the tropical Andes facilitated diversification of wax palms (Ceroxylon: Arecaceae) through geographical colonization and climatic niche separation. Sanín, M. J., Kissling, W.D., Bacon, C.D., Borchsenius, F., Galeano, G., Svenning, J., Olivera, J., Ramírez, R., Trénel, P., Pintaud, J. Biogeography, Plants, Neotropics, Systematics Botanical Journal of the Linnean Society Research article 2016 Link Bacon, C.D.
Exploring palm-insect interactions across geographic and environmental gradients. Restrepo Correa, Z., Nunez Avellanada, L.A., Gonzalez-Caro, S., Velasquez-Puentes, F., Bacon, C.D. Plants, Neotropics, Biogeography Botanical Journal of the Linnean Society Research article 2016 Link Bacon, C.D.
Progress to extinction: increased specialisation causes the demise of animal clades. Raia, P., Carotenuto, F., Mondanaro, A., Castiglione, S., Passaro, F., Saggese, F., Melchionna, M., Serio, C., Alessio, L., Silvestro, D., Fortelius, M. Palaeontology, Animals, Methods and Tools Scientific Reports Research article 2016 Link Silvestro, D.
Annotating public fungal ITS sequences from the built environment according to the MIxS-Built Environment standard – a report from a May 23-24, 2016 workshop (Gothenburg, Sweden). Abarenkov, K., Adams, R.I., Irinyi, L., Agan, A., Ambrosio, E., Antonelli, A., Bahram, M., Bengtsson-Palme, J., Bok, G., Cangren, P., Coimbra, V., Coleine, C., Gustafsson, C., He, J., Andermann, T., Kristiansson, E., Larsson, E., Larsson, T., Liu, Y., Martinsson, S., Meyer, W., Panova, M., Pombubpa, N., Duarte Ritter, C., Ryberg, M., Svantesson, S., Scharn, R., Svensson, O., Töpel, M., Unterseher, M., Visagie, C., Wurzbacher, C., Taylor, A.F.S., Kõljalg, U., Schriml, L., Nilsson, R.H. Fungi, Methods and Tools, Global MycoKeys Research article 2016 Link Antonelli, A., Andermann, T.
Unexpectedly high beta-diversity of root-associated fungal communities in the Bolivian Andes. Barnes, C.J., Maldonado, C., Frøslev, T.G., Antonelli, A., Rønsted, N. Fungi, Neotropics, Systematics Frontiers in Microbiology Research article 2016 Link Antonelli, A.
The discovery of the Amazonian tree flora with an updated checklist of all known tree taxa. ter Steege, H., Vaessen, R. W., Cárdenas-López, D., Sabatier, D., Antonelli, A., Mota de Oliveira, S., Pitman, N.C.A., Møller Jørgensen, P., Salomão, R.P. Plants, Neotropics, Systematics Nature Scientific Reports Research article 2016 Link Antonelli, A.
Bridging inter- and intraspecific trait evolution with a hierarchical Bayesian approach. Kostikova, A., Silvestro, D., Pearman, P. B., Salamin, N. Methods and Tools Systematic Biology Research article 2016 Link Silvestro, D.
Competition and extinction explain the evolution of diversity in American automobiles. Gjesfjeld, E., Chang, J., Silvestro, D., Kelty, C., Alfaro M. E. Methods and Tools Palgrave Communications Research article 2016 Link Silvestro, D.
Tectonic blocks and molecular clocks. De Baets, K., Antonelli, A., Donoghue, P. Biogeography, Palaeontology, Global, Methods and Tools Philosophical Transactions Research article 2016 Link Antonelli, A.
Top 50 most wanted fungi. Nilsson, R. H., Wurzbacher, C., Bahram, M., Coimbra, V.R.M., Larsson, E., Tedersoo, L., Eriksson, J.S., Duarte Ritter, C., Svantesson, S., Sánchez-García, M., Ryberg, M., Kristiansson, E., Abarenkov, K. Fungi, Global MycoKeys Research article 2016 Link Eriksson, J.S.
Quaternary glaciation and the Great American Biotic Interchange. Bacon, C.D., Molnar, P., Antonelli, A., Crawford, A.J., Montes, C., Vallejo-Pareja, M.C. Palaeontology, Animals, Plants, Neotropics, Biogeography Geology Research article 2016 Link Bacon, C.D., Antonelli, A.
The abiotic and biotic drivers of rapid diversification in Andean bellflowers (Campanulaceae). Lagomarsino, L.P., Condamine, F.L., Antonelli, A., Mulch, A., Davis, C.C. Plants, Biogeography, Methods and Tools, Systematics New Phytologist Research article 2016 Link Antonelli, A.
Fossil biogeography: a new model to infer dispersal, extinction and sampling from palaeontological data. Silvestro, D., Zizka, A., Bacon, C.D., Cascales-Miñana, B., Salamin, N., Antonelli, A. Methods and Tools, Biogeography, Palaeontology, Global Philosophical Transactions of the Royal Society Research article 2016 Link Silvestro, D., Bacon, C.D., Antonelli, A.
Ancient islands acted as refugia and pumps for conifer diversity. Condamine, F.L., Leslie, A.B., Antonelli, A. Biogeography, Palaeotropics, Plants Cladistics Research article 2016 Link Antonelli, A.
Intra and interspecific sequence variation in closely related species of Cereus (CACTACEAE) Biochemical Systematics and Ecology 65 137-142. Silva, G.A.R., Jojima, C., Moraes, E.M., Antonelli, A., Manfrin, M.H., Franco, F.F. Systematics, Plants, Neotropics Biochemical Systematics and Ecology Research article 2016 Link Antonelli, A.
Biogeography of the Malagasy Celastraceae: Multiple independent origins followed by widespread dispersal of genera from Madagascar. Bacon, C.D., Simmons, M.P., Archer, R.H., Zhao, L., Andriantiana, J. Biogeography, Africa, Plants Molecular Phylogenetics and Evolution Research article 2016 Link Bacon, C.D.
Neotropical biogeography: Possible goals and challenges for the next ten years. Antonelli, A. Neotropics, Biogeography, Plants, Animals Biogeografia da América do Sul / Análise de Tempo, Espaço e Forma Book chapter 2016 PDF Antonelli, A.
Floristic biogeography of South America. Fiaschi, P., Pirani, J. R., Heiden, G., Antonelli, A. Neotropics, Biogeography, Plants Biogeografia da América do Sul / Análise de Tempo, Espaço e Forma Book chapter 2016 PDF Antonelli, A.
Reply to Lessios and Marko et al.: Early and progressive migration across the Isthmus of Panama is robust to missing data and biases. Bacon, C.D., Silvestro, D., Jaramillo, C., Smith, B.T., Chakrabarty, P., Antonelli, A. Biogeography, Neotropics, Plants, Animals Proceedings of the National Academy of Sciences of the USA Research article 2015 Link Bacon, C.D., Silvestro, D., Antonelli, A.
Multiple origins of mountain life. Antonelli, A. Biogeography Nature Overview article 2015 Link Antonelli, A.
Biological evidence supports an early and complex emergence of the Isthmus of Panama. Bacon, C.D., Silvestro, D., Jaramillo, C., Smith, B.T., Chakrabarty, P., Antonelli, A. Biogeography, Neotropics, Plants, Animals Proceedings of the National Academy of Sciences of the USA Research article 2015 Link Bacon, C.D., Silvestro, D., Antonelli, A.
The role of clade competition in the diversification of North American canids. Silvestro, D., Antonelli, A., Salamin, N., Quental, T.B. Animals, Methods and Tools, Biogeography, Temperate zone Proceedings of the National Academy of Sciences of the USA Research article 2015 Link Silvestro, D., Antonelli, A.
A network approach for identifying and delimiting biogeographical regions. Vilhena, D., Antonelli, A. Methods and Tools, Biogeography, Global Nature Communications Research article 2015 Link Antonelli, A.
An engine for global plant diversity: Highest evolutionary turnover and emigration in the American tropics. Antonelli, A., Zizka, A., Silvestro, D., Scharn, R., Cascales-Miñana, B., Bacon, C.D. Biogeography, Global, Biogeography Frontiers in Genetics Research article 2015 Link Antonelli, A., Silvestro, D., Bacon, C.D.
Estimating species diversity and distribution in the era of Big Data: To what extent can we trust public databases? Maldonado, C., Molina, C., Zizka, A., Persson, C., Taylor, C., Alban, J., Chilquillo, N., Rønsted, N., Antonelli, A. Neotropics, Plants, Methods and Tools Global Ecology and Biogeography Research article 2015 Link Antonelli, A.
Assessing the impact of phylogenetic incongruence on taxonomy, floral evolution, biogeographical history, and phylogenetic diversity. Zhang, Q., Feild, T.S., Antonelli, A. Systematics, Plants, Biogeography, Global American Journal of Botany Research article 2015 Link Antonelli, A.
Traditional plant use in Burkina Faso (West Africa): a national-scale analysis with focus on traditional medicine. Zizka, A., Thiombiano, A., Dressler, S., Nacoulma, B.M.I., Ouédraogo, A., Ouédraogo, I., Ouédraogo, O., Zizka, G., Hahn, K., Schmidt, M. Plants, Africa Journal of Ethnobiology Ethnomedicine Research article 2015 Link
Available climate regimes drive niche diversification in grasses during range expansion. Wüest, R., Antonelli, A., Zimmermann, N., Linder, H.P. Plants, Biogeography, Global The American Naturalist Research article 2015 Link Antonelli, A.
South American Vegetation Types. Fiaschi, P., Heiden, G., Antonelli, A., Pirani, J.R. Neotropics Figshare Overview article 2015 Link Antonelli, A.
Revisiting the origin and diversification of vascular plants through a comprehensive Bayesian analysis of the fossil record. Silvestro, D., Cascales-Miñana, B., Bacon, C.D., Antonelli, A. Palaeontology, Biogeography, Plants, Global New Phytologist Research article 2015 Link Silvestro, D., Bacon, C.D., Antonelli, A.
The origin of oranges: a multi-locus phylogeny of Rutaceae subfamily Aurantioideae. Schwartz, T., Nylinder, S., Ramadugu, C., Antonelli, A., Pfeil, B.E. Systematics, Plants, Global, Biogeography Systematic Botany Research article 2015 Link Antonelli, A.
Phylogeny, classification, and fruit evolution of the species-rich Neotropical bellflowers (Campanulaceae: Lobelioideae). Lagomarsino, L., Antonelli, A., Muchhala, N., Mathews, S., Davis, C. C. Systematics, Plants, Neotropics American Journal of Botany Research article 2015 Link Antonelli, A.
Measurement errors should always be incorporated in phylogenetic comparative analysis. Silvestro, D., Kostikova A., Litsios G., Pearman P. B., Salamin N. Methods and Tools, Biogeography Methods in Ecology and Evolution Research article 2015 Link Silvestro, D.
Global diversification of a tropical plant growth form: environmental correlates and historical contingencies in climbing palms. Couvreur, T.L.P., Kissling, W.D., Condamine, F.L., Svenning, J-C., Rowe, N.P., Baker, W.J. Plants, Biogeography, Global Frontiers in Genetics Research article 2015 Link
Diversity, natural history, and geographic distribution of snakes in the Caatinga, Northeastern Brazil. Guedes, T.B., Nogueira, C., Marques, O.A.V. Biogeography, Animals, Neotropics Zootaxa Research article 2014 Link Guedes, T.B.
PyRate: a new program to estimate speciation and extinction rates from incomplete fossil data. Silvestro, D., Salamin, N., Schnitzler, J. Methods and Tools, Biogeography Methods in Ecology and Evolution Research article 2014 Link Silvestro, D.
Biogeography, vicariance and conservation of snakes of the neglected and endangered Caatinga region, north-eastern Brazil. Guedes, T.B., Sawaya, R.J., Nogueira, C.C. Biogeography, Animals, Neotropics Journal of Biogeography Research article 2014 Link Guedes, T.B.
The red island and the seven dwarfs: body size reduction in Cheirogaleidae. Masters, J.C., Génin, F., Silvestro, D., Lister, A.M., DelPero, M. Animals, Biogeography, Africa Journal of Biogeography Research article 2014 Link Silvestro, D.
Cretaceous environmental changes led to high extinction rates in a hyperdiverse beetle family. Kergoat, G.J., Bouchard, P., Clamens, A., Abbate, J.L., Jourdan, H., Jabbour-Zahab, R., Genson, G., Soldati, L., Condamine, F.L. Biogeography, Animals BMC Evolutionary Biology Research article 2014 Link
Disentangling the influence of climatic and geological changes on species radiations. Linder, H.P., Rabosky, D.L., Antonelli, A., Wüest, R.O., Ohlemüller, R. Biogeography, Plants, Global Journal of Biogeography Research article 2014 Link Antonelli, A.
Improving ITS sequence data for identification of plant pathogenic fungi. Nilsson, R.H., Hyde, K.D., Pawlowska, J., Ryberg, M., Tedersoo, L., Aas, A.B., Alias, S.A., Alves, A., Anderson, C.L., Antonelli, A., Arnold, A.E., Bahnmann, B., Bahram, M., Bengtsson-Palme, J., Berlin, A., Branco, S., Chomnunti, P., Dissanayake, A., Drenkhan, R., Friberg, H., Frøslev, T.G., Halwachs, B., Hartmann, M., Henricot, B., Jayawardena, R., Jumpponen, A., Kauserud, H., Koskela, S., Kulik, T., Liimatainen, K., Lindahl, B., Lindner, D., Liu, J-K., Maharachchikumbura, S., Manamgoda, D., Martinsson, S., Neves, M.A., Niskanen, T., Nylinder, S., Pereira, O.L., Pinho, D.B., Porter, T.M., Queloz, V., Riit, T., Sanchez-García, M., de Sousa, F., Stefaczyk, E., Tadych, M., Takamatsu, S., Tian, Q., Udayanga, D., Unterseher, M., Wang, Z., Wikee, S., Yan, J., Larsson, E., Larsson, K-H., Kõljalg, U., Abarenkov, K. Fungi, Methods and Tools, Global Fungal Diversity Research article 2014 Link Antonelli, A.
Bayesian Estimation of Speciation and Extinction from Incomplete Fossil Occurrence Data. Silvestro, D., Schnitzler, J., Liow, L.H., Antonelli, A., , Salamin, N. Methods and Tools, Biogeography Systematic Biology Research article 2014 Link Silvestro, D., Antonelli, A.
Faster Speciation and Reduced Extinction in the Tropics Contribute to the Mammalian Latitudinal Diversity Gradient. Rolland, J., Condamine, F.L., Jiguet, F., Morlon, H. Animals, Biogeography, Global PLOS Biology Research article 2014 Link
Biome evolution and biogeographical change through time. Bacon, C.D. Biogeography, Neotropics Frontiers of Biogeograpy Overview article 2013 PDF Bacon, C.D.
A horizon scan of Biogeography. Dawson, M.N., Algar, A.C., Antonelli, A., Dávalos, L.M., Davis, E., Early, R., Guisan, A., Jansson, R., Lessard, J-P., Marske, K.A., McGuire, J.L., Stigall, A.L., Swenson, N.G., Zimmermann, N.E., Gavin, D.G. Biogeography, Global Frontiers of Biogeography Overview article 2013 PDF Antonelli, A.
Fine-scale endemism of Amazonian birds in a threatened Landscape. Fernandes, A.M. Animals, Neotropics, Biogeography Biodiversity and Conservation Research article 2013 Link
Multilocus phylogeography of the Wedge-billed Woodcreeper Glyphorynchus spirurus (Aves, Furnariidae) in lowland Amazonia: Widespread cryptic diversity and paraphyly reveal a complex diversification pattern. Fernandes, A.M., Gonzalez, J., Wink, M., Aleixo, A. Animals, Neotropics, Biogeography Molecular Phylogenetics and Evolution Research article 2013 Link
Geographic and taxonomic disparities in species diversity: dispersal and diversification rates across Wallace's line. Bacon, C.D., Michonneau, F., Henderson, A.J., McKenna, M.J., Milroy, A.M., Simmons, M.P. Biogeography, Plants, Palaeotropics Evolution Research article 2013 Link Bacon, C.D.
Biodiversity from Mountain Building. Hoorn, C., Mosbrugger, V., Mulch, A., Antonelli, A. Palaeontology, Biogeography, Plants, Animals Nature Geoscience Overview article 2013 Link Antonelli, A.
Evolution of multicellularity coincided with increased diversification of cyanobacteria and the Great Oxidation Event. Schirrmeister, B.E., de Vos, J., Antonelli, A., Bagheri, H.C. Microorganisms, Global, Biogeography Proceedings of the National Academy of Sciences of the USA Research article 2013 Link Antonelli, A.
What determines biogeographical ranges? Historical wanderings and ecological constraints in the danthonioid grasses. Linder, H.P., Antonelli, A., Pirie, M.D., Humphreys, A.M., Wüest, R.O. Plants, Global, Biogeography Journal of Biogeography Research article 2013 Link Antonelli, A.
Neotropical Plant Evolution: Assembling the Big Picture. Hughes, C., Pennington, R.T., Antonelli, A. Plants, Neotropics, Biogeography Botanical Journal of the Linnean Society Research article 2013 Link Antonelli, A.
Chilean Pitavia more closely related to Oceania and Old World Rutaceae than to Neotropical groups: evidence from two cpDNA non-coding regions, with a new subfamilial classification of the family. Groppo, M., Kallunki, J.A., Pirani, J.R., Antonelli, A. Plants, Global, Systematics PhytoKeys Research article 2012 Link Antonelli, A.
Phylogeography of the chestnut-tailed antbird (Myrmeciza hemimelaena) clarifies the role of rivers in Amazonian biogeography. Fernandes, A.M., Wink, M., Aleixo, A. Animals, Neotropics, Biogeography Journal of Biogeography Research article 2012 Link
Model uncertainty in ancestral area reconstruction: A parsimonious solution? Pirie, M. D., Humphreys, A.M., Antonelli, A., Galley, C., Linder, H.P. Plants, Temperate zone, Biogeography Taxon Research article 2012 PDF Antonelli, A.
Past Climate Change and Plant Evolution in Western North America: A Case Study in Rosaceae. Töpel, M., Antonelli, A., Yesson, C., Eriksen, B. Plants, Temperate zone, Biogeography PLoS One Research article 2012 Link Antonelli, A.
Suckulenter. Petri, A., Antonelli, A. Plants Göteborgs Botaniska Trädgårds Förlag Popular science 2012 PDF Antonelli, A.
Origins of Biodiversity–Response. Hoorn, C., Wesselingh, F.P., ter Steege, H., Bermudez, M.A., Mora, J., Sevink, I., Sanmartín, A., Sanchez-Meseguer, C.L., Anderson, J., Figueiredo, C., Jaramillo, D., Riff, F.R., Negri, H., Hooghiemstra, J., Lundberg, T., Stadler, T., Sarkinen, T., Antonelli, A. Biogeography, Plants, Animals, Palaeontology, Neotropics Science Overview article 2011 Link Antonelli, A.
Reconstructing the Spatiotemporal Evolution of the Ancient Angiosperm Genus Hedyosmum (Chloranthaceae) Using Empirical and Simulated Approaches: Mass Extinction, Gradual Cooling, or Rapid Radiation? Antonelli, A., Sanmartín, I. Systematics, Biogeography, Plants, Global Systematic Biology Research article 2011 Link Antonelli, A.
Evolution of cyanobacterial morphotypes: Taxa required for improved phylogenomic approaches. Schirrmeister, B.E., Anisimova, M., Antonelli, A., Bagheri, H.C. Microorganisms, Global Communicative and Integrative Biology Overview article 2011 Link Antonelli, A.
Revisiting taxonomy, morphological evolution, and fossil calibration strategies in Chloranthaceae. Zhang, Q., Antonelli, A., Feild, T.S., Kong, H.-Z. Systematics, Biogeography, Plants, Global Journal of Systematics and Evolution Research article 2011 Link Antonelli, A.
Ecology and evolution of the diaspore ‘burial syndrome’. Humphreys, A.M., Antonelli, A., Pirie, M.D., Linder, H.P. Plants, Temperate zone Evolution Research article 2011 Link Antonelli, A.
Why are there so many plant species in the Neotropics? Antonelli, A., Sanmartín, I. Plants, Animals, Palaeontology, Neotropics, Biogeography Taxon Research article 2011 PDF Antonelli, A.
Absence of mammals and the evolution of New Zealand grasses. Antonelli, A., Humphreys, A.M., Lee, W.G., Linder, H.P. Animals, Temperate zone, Plants, Biogeography Proceedings of the Royal Society Series B: Biological Sciences Research article 2011 Link Antonelli, A.
Estimating the age of fire in the Cape Flora of South Africa from an orchid phylogeny. Bytebier, B., Antonelli, A., Bellstedt, D.U., Linder, P. Plants, Biogeography, Systematics, Africa Proceedings of the Royal Society Series B: Biological Sciences Research article 2011 Link Antonelli, A.
The origin of multicellularity in cyanobacteria. Schirrmeister, B., Antonelli, A., H. Bagheri. Microorganisms, Global BMC Evolutionary Biology Research article 2011 Link Antonelli, A.
Vicariance or long-distance dispersal: historical biogeography of the pantropical subfamily Chrysophylloideae (Sapotaceae). Bartish, I.V., Antonelli, A., Richardson, J.E., Swenson, U. Plants, Biogeography, Systematics, Global Journal of Biogeography Research article 2011 Link Antonelli, A.
Amazonia through time: Andean uplift, climate change, landscape evolution and biodiversity. Hoorn, C., Wesselingh, F.P., ter Steege, H., Bermudez, M.A., Mora, A., Sevink, J., Sanmartín, I., Sanchez-Meseguer, A., Anderson, C.L., Figueiredo, J.P., Jaramillo, C., Riff, D., Negri, F.R., Hooghiemstra, H., Lundberg, J., Stadler, T., Sarkinen, T., Antonelli, A. Biogeography, Plants, Animals, Palaeontology, Neotropics Science Research article 2010 Link Antonelli, A.
Climate cooling promoted the expansion and radiation of a threatened group of South American orchids (Epidendroideae:Laeliinae). Antonelli, A., Verola, C.F., Parisod, C., Gustafsson, A.L.S. Biogeography, Systematics, Plants, Neotropics Biological Journal of the Linnean Society Research article 2010 Link Antonelli, A.
Reassessing the temporal evolution of orchids with new fossils and a Bayesian relaxed clock, with implications for the diversification of the rare South American genus Hoffmannseggella (Orchidaceae: Epidendroideae). Gustafsson, A.L.S., Verola, C.F., Antonelli, A. Biogeography, Global, Plants BMC Evolutionary Biology Research article 2010 Link Antonelli, A.
Molecular studies and phylogeography of Amazonian tetrapods and their relation to geological and climatic models. Antonelli, A., Quijada-Masareñas, A., Crawford, A.J., Bates, A.J., Velazco, J.M., Wüster, W. Biogeography, Neotropics, Animals Amazonia, Landscape and Species Evolution Book chapter 2010 Link Antonelli, A.
n the origin of Amazonian landscapes and biodiversity: a synthesis Wesselingh, F. P., Hoorn, C., Kroonenberg, S.B., Antonelli, A., Lundberg, J.G., Vonhof, H.B., Hooghiemstra, H. Biogeography, Neotropics, Palaeontology, Plants, Animals Amazonia, Landscape and Species Evolution Book chapter 2010 Link Antonelli, A.
Placement of Kuhlmanniodendron Fiaschi & Groppo in Lindackerieae (Achariaceae, Malpighiales) confirmed by analyses of rbcL sequences, with notes on pollen and wood anatomy. Groppo, M., Fiaschi, P., Salatino, M.L.F., Ceccantini, G.T., Santos, F.A.R., Verola, C., Antonelli, A. Systematics, Plants, Neotropics Plant Systematics and Evolution Research article 2010 Link Antonelli, A.
Tracing the impact of the Andean uplift on Neotropical plant evolution. Antonelli, A., Nylander, J.A.A., Persson, C., Sanmartín, I. Systematics, Biogeography, Plants, Neotropics Proceedings of the National Academy of Sciences of the USA Research article 2009 Link Antonelli, A.
Have giant lobelias evolved several times independently? Life form shifts and historical biogeography of the cosmopolitan and highly diverse subfamily Lobelioideae (Campanulaceae). Antonelli, A. Systematics, Plants, Global BMC Biology Research article 2009 Link Antonelli, A.
Pollination of the Lady’s slipper orchid (Orchidaceae: Cypripedium calceolus) in southern Scandinavia: taxonomic and conservational aspects. Antonelli, A., Dahlberg, C.J., Karlgren, K.H.I., Appelqvist, T. Ecology, Temperate zone Nordic Journal of Botany Research article 2009 Link Antonelli, A.
Brazil Should Facilitate Research Permits. Antonelli, A., Rodriguez, V. Neotropics Conservation Biology Overview article 2009 Link Antonelli, A.
A phylogenetic approach to detect selection on the target site of the antifouling compound irgarol 1051 in tolerant periphyton communities. Eriksson, K.M., Antonelli, A., Clarke, A.K., Blanck, H. Microorganisms, Temperate zone Environmental Microbiology Research article 2009 Link Antonelli, A.
Gaining access to biological material from Brazil. Rodriguez, V., Antonelli, A. Neotropics, Taxon Overview article 2009 PDF Antonelli, A.
Higher level phylogeny and evolutionary trends in Campanulaceae subfam.Lobelioideae: Molecular signal overshadows morphology. Antonelli, A. Systematics, Plants, Global Molecular Phylogenetics and Evolution Research article 2008 Link Antonelli, A.
The Peniophorella praetermissa species complex (Basidiomycota). Hallenberg, N., Nilsson, H.R., Antonelli, A., Wu, S.H., Maekawa, N., Nordén, B. Systematics, Fungi, Global Mycological Research Research article 2007 Link Antonelli, A.
Biosystematic studies in Brazilian endemic genus Hoffmannseggella H.G.Jones (Orchidaceae: Laeliinae): a multiple approach applied to conservation. Antonelli, A. Systematics, Plants, Neotropics Lankesteriana Research article 2007 Link Antonelli, A.
Phylogeny of the tribe Cinchoneae (Rubiaceae), its position in Cinchonoideae, and description of a new genus, Ciliosemina. Andersson, L., Antonelli, A. Systematics, Plants, Neotropics Taxon Research article 2005 PDF Antonelli, A.
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