One sentence in a book leads researchers to a species not seen in over 100 years |
Farooq, H., Perrigo, A. |
Africa |
The Conversation |
Popular science |
2021 |
Link |
Farooq, H., Perrigo, A. |
Distribution and ecology of dictyostelids in Madagascar |
Cavender, J.C., Landolt, J.C., Vadell, E-.M., Perrigo, A., Stephenson, S.L., Wrigley De Basanta, D., Lado, C., Liu, P. |
Systematics, microorganisms, Africa |
Phytotaxa |
Research article |
2021 |
Link |
Perrigo, A. |
Search for elusive skinks is filling gaps in Mozambique’s biodiversity data |
Farooq, H., Perrigo, A. |
Africa |
The Conversation |
Popular science |
2021 |
Link |
Farooq, H., Perrigo, A. |
Can we identify European snakes by color patterns? |
Farooq, H., Uetz, P. |
Snakes, Europe |
Salamandra |
Research article |
2021 |
Link |
Farooq, H. |
The taxonomic impediment: a shortage of taxonomists, not the lack of technical approaches. |
Engel, M.S., Ceríaco, L.M.P., Daniel, G.M., Dellapé, P.M., Löbl, I., Marinov, M., Reis, R.E., Young, M.T., Dubois, A., Agarwal, I., Lehmann A., P., Alvarado, M., Alvarez, N., Andreone, F., Araujo-Vieira, K., Ascher, J.S., Baêta, D., Baldo, D., Bandeira, S.A., Barden, P., Barrasso, D.A., Bendifallah, L., Bockmann, F.A., Böhme, W., Borkent, A., Brandão, C.R.F., Busack, S.D., Bybee, S.M., Channing, A., Chatzimanolis, S., Christenhusz, M.J.M., Crisci, J.V., D’elía, G., Da Costa, L.M., Davis, S.R., De Lucena, C.A.S., Deuve, T., Fernandes Elizalde, S., Faivovich, J., Farooq, H., Ferguson, A.W., Gippoliti, S., Gonçalves, F.M.P., Gonzalez, V.H., Greenbaum, E., Hinojosa-Díaz, I.A., Ineich, I., Jiang, J., Kahono, S., Kury, A.B., Lucinda, P.H.F., Lynch, J.D., Malécot, V., Marques, M.P., Marris, J.W.M., Mckellar, R.C., Mendes, L.F., Nihei, S.S., Nishikawa, K., Ohler, A., Orrico, V.G.D., Ota, H., Paiva, J., Parrinha, D., Pauwels, O.S.G., Pereyra, M.O., Pestana, L.B., Pinheiro, P.D.P., Prendini, L., Prokop, J., Rasmussen, C., Rödel, M.O., Rodrigues, M.T., Rodríguez, S.M., Salatnaya, H., Sampaio, Í., Sánchez-García, A., Shebl, M.A., Santos, B.S., Solórzano-Kraemer, M.M., Sousa, A.C.A., Stoev, P., Teta, P., Trape, J.F., Van-Dúnem Dos Santos, C., Vasudevan, K., Vink, C.J., Vogel, G., Wagner, P., Wappler, T., Ware, J.L., Wedmann, S., Kusamba Zacharie, C. |
Taxonomy |
Zoological journal of the Linnean Society |
Research article |
2021 |
Link |
Farooq, H. |
A Reassessment of the Little-Known Amazonian Fern Diplazium praestans Based on Molecular and Morphological Evidence |
Riibe, L., Sundue, M., Sessa, E, Testo, W. |
Systematics, Plants, Neotropics |
Systematic Botany |
Research article |
2021 |
Link |
Testo, W. |
Mountains, climate and niche heterogeneity explain global patterns of fern diversity |
Suissa, J., Sundue, M., Testo, W. |
Global, Biogeography, Plants |
Journal of Biogeography |
Research article |
2021 |
Link |
Testo, W. |
Pleistocene aridification underlies the evolutionary history of the Caribbean endemic, insular, giant Consolea (Opuntioideae) |
Majure, L.C., Barrios, D., Díaz, E., Zumwalde, B., Testo, W., Negrón‐Ortíz V. |
Neotropics, Biogeography, Plants |
American Journal of Botany |
Research article |
2021 |
Link |
Testo, W. |
Asplenium scolopendrium var. americanum (Aspleniaceae) found in New Mexico, USA. |
Testo, W., Watkins, J., Wiley, J., Baumann, L., Weaver E. |
Temperate zone, Plants |
American Fern Journal |
Research article |
2021 |
Link |
Testo, W. |
A target enrichment probe set for resolving the flagellate land plant tree of life |
Breinholt, J.W., Carey, S.B., Tiley, G.P., Davis, E.C., Endara, L, McDaniel, S.F., Neves, L.G., Sessa, E.B., von Konrat, M., Chantanaorrapint, S., Fawcett, S., Ickert-Bond, S.M., Labiak, P.H., Larraín, J., Lehnert, M., Lewis, L.R., Nagalingum, N.S., Patel, N., Rensing, S.A., Testo, W., Vasco, A., Villarreal, J.C., Williams, E.W., Burleigh, J.G. |
Methods and Tools, Global |
Applications in Plant Sciences |
Research article |
2021 |
Link |
Testo, W. |
Identifying flow modules in ecological networks using Infomap |
Farage, C., Edler, D., Eklöf, A., Rosvall, M., Pilosof, S. |
Ecology |
Methods in Ecology and Evolution |
Research article |
2021 |
Link |
Edler, D. |
How choosing random-walk model and network representation matters for flow-based community detection in hypergraphs |
Eriksson, A. , Edler, D., Rojas, A., de Dominico, M., Rosvall, M. |
Other |
Communications Physics |
Research article |
2021 |
Link |
Edler, D. |
Prior choice affects ability of Bayesian neural networks to identify unknowns |
Silvestro, D., Andermann T. |
Machine Learning, Neural Networks |
arXiv preprint |
Research article |
2021 |
Link |
Andermann T. |
Phylogenomics of the tropical plant family Ochnaceae using targeted enrichment of nuclear genes and 250+ taxa |
Schneider, J. V., Jungcurt, T., Cardoso, D, Amorim, A.M., Töpel, M., Andermann, T., Poncy, O., Berberich, T, Zizka, G. |
Plants, Phylogenomics |
Taxon |
Research article |
2020 |
Link |
Andermann, T. |
IUCNN - deep learning approaches to approximate species extinction risk |
Zizka, A., Andermann, T., Silvestro, D. |
Machine Learning, Neural Networks, Plants |
Diversity and Distributions |
Research article |
2021 |
Link |
Andermann, T. |
The evolution of open habitats in North America revealed by deep learning models |
Andermann, T., Strömberg, C., Antonelli, A., Silvestro, S. |
Machine Learning, Neural Networks, Vegetation |
bioRxiv preprint |
Research article |
2021 |
Link |
Andermann, T., Antonelli, A. |
Why we shouldn’t blame women for gender disparity in academia: perspectives of women in zoology |
Slobodian, V., Soares, K.D.A., Falaschi, R.L., Prado, L.R., Camelier, P., Guedes, T.B., Leal, L.C., Hsiou, A.S., Del-Rio, G., Costa, E.R., Pereira, K.R.C., D’Angiolella, A.B., Susa, S.A., Diele-Viegas, L.M. |
Diversity in Science |
Zoologia |
Research article |
2021 |
Link |
Guedes, T.B. |
Taxonomic status of Apostolepis tertulianobeui Lema, 2004 based on an integrative revision of Apostolepis assimilis (Reinhardt, 1861) (Serpentes: Dipsadidae) |
Entiauspe-Neto, O.M., Koch, C., Gray, R.J., Tiutenko, A., Loebmann, D., Guedes, T.B. |
Zoology, Taxonomy |
Zoologischer Anzeiger |
Research article |
2021 |
Link |
Guedes, T.B. |
The striking endemism pattern of the species-richest genus Atractus (Dipsadidae: Serpentes) higlights the hidden diversity in the Andes |
Pomar-Gómez, A.D., Cordeiro, P., Guedes, T.B., Passos, P. |
Biogeography, Zoology |
Amphibia-Reptilia |
Research article |
2021 |
Link |
Guedes, T.B. |
Temperature predicts leaf shape in palms (Arecaceae) |
Torres Jimenez, M.F., Chazot, N., Emilio, T., Uddling, J, Antonelli, A, Faurby, S, Bacon, C.D. |
Ecology, Global, Plants |
bioRxiv |
Research article |
2021 |
Link |
Torres Jimenez. M.F., Antonelli, A. |
A matryoska of scales: a single specimen reveals multiple new aspects of diet and distribution of snakes |
Guedes, T.B. |
Zoology |
Herpetology Notes |
Research article |
2021 |
Link |
Guedes, T.B. |
Rediscovery of the snake Siphlophis pulcher (Raddi, 1820) (Serpentes: Dipsadidae: Pseudoboini) in the state of Paraná, southern Brazil |
Guedes, T.B., Oliveira, G |
Zoology, Distribution |
Herpetologia Brasileira |
Research article |
2020 |
Link |
Guedes, T.B. |
Raising of Lazarus: Rediscovery and redescription of Apostolepis niceforoi Amaral, 1935 (Serpentes: Dipsadidae: Elapomorphini) |
Entiauspe-Neto, O.M., Rangel, G.F., Guedes, T.B., Tiutenko, A. |
Zoology, Taxonomy, Distribution |
Holotipus |
Research article |
2020 |
Link |
Guedes, T.B. |
Revisiting the taxonomic status of Apostolepis sanctaeritae, a forgotten Neotropical dipsadid snake |
Entiauspe-Neto, O.M., Koch, C., Guedes, T.B., Tiutenko, A. |
Zoology, Taxonomy |
Salamandra |
Research article |
2020 |
Link |
Guedes, T.B. |
First record of Thamnodynastes almae Franco & Ferreira, 2002 (Serpentes, Dipsadidae, Xenodontinae) in the state of Piauí, northeastern Brazil, and updated distribution map |
Barbosa, D.B.S., Lima, M.S.C.S., Guedes, T.B. |
Zoology, Distribution |
Check List |
Research article |
2020 |
Link |
Guedes, T.B. |
Notes on court and copula, fertility, nest, eggs and hatchlings of the Caatinga’s Black snake Boiruna sertaneja Zaher, 1996 (Serpentes: Dipsadidae) from northeastern Brazil. |
Guedes, T.B., Guedes, A. |
Zoology, Natural History |
Anais da Academia Brasileira de Ciências |
Research article |
2020 |
Link |
Guedes, T.B. |
Updated distribution maps with new records of Trilepida fuliginosa (Passos, Caramaschi & Pinto, 2006) and Drepanoides anomalus(Jan, 1863) (Squamata, Serpentes) in the state of Maranhão, northeastern Brazil |
Guedes, T.B., Queiroz, A., Sousa, P., Hamdan, B. |
Zoology, Distribution |
Check List |
Research article |
2020 |
Link |
Guedes, T.B. |
New record for Colombia, updated distribution map, and comments on the defensive behavior of Thamnodynastes dixoni Bailey & Thomas, 2007 (Serpentes, Dipsadidae, Xenodontinae) |
Rojas-Morales, J.A., Ramírez-Chaves, H.E., Guedes, T.B. |
Zoology, Distribution |
Check List |
Research article |
2020 |
Link |
Guedes, T.B. |
Biogeographic tools help to assess the effectiveness of protected areas for the conservation of anurans in the Mantiqueira mountain range, Southeastern Brazil |
Peixoto, M.A., Guedes, T.B., Silva, E.T., Feio, R.N. |
Biogeography, Zoology, Conservation |
Journal for Nature Conservation |
Research article |
2020 |
Link |
Guedes, T.B. |
A complex biogeographic history of diversification in Neotropical Lancehead pitvipers (Serpentes, Viperidae) |
Hamdan, B., Guedes, T.B., Carrasco, P., Melville, J. |
Systematics, Zoology, Biogeography |
Zoologica Scripta |
Research article |
2020 |
Link |
Guedes, T.B. |
Diversity, endemism, and evolutionary montane biotas outside the Andean Region |
Guedes, T.B., Azevedo, J.A.R, Bacon, C.D., Provete, D., Antonelli, A. |
Biogeography, Neotropics |
Springer |
Book chapter |
2020 |
Link |
Guedes, T.B, Azevedo, J.A.R, Antonelli, A. |
On the young savannas in the land of ancient forests |
Azevedo, J.A.R., Collevatti, R., Bacon, C.D., Zizka, A., Guedes, T.B., Matos, P., Faurby, S., Carvalho, F., Carrillo, J., Jaramillo, C., Strömberg, C., Hirota, M., Antonelli, A. |
Neotropics |
Springer |
Book chapter |
2020 |
Link |
Azevedo, J.A.R., Guedes, T.B., Antonelli, A. |
Mapping Africa’s biodiversity: More of the same is just not good enough |
Farooq, H., Anderson, J., Soares, A., Antonelli, A., Faurby, S. |
Biodiversity, Africa, Methods and Tools, Global |
Systematic Biology |
Research article |
2020 |
Link |
Farooq, H., Anderson, J., Antonelli, A., Faurby, S. |
Identifying Australian snakes by color patterns |
Farooq, H., Uetz, P. |
Animals |
Vertebrate Zoology |
Research article |
2020 |
Link |
Farooq, H. |
Mapping flows on sparse networks with missing links |
Smiljanić, J., Edler, D., Rosvall, M |
Other |
Physical Review E |
Research article |
2020 |
Link |
Edler, D. |
Identifying flow modules in ecological networks using Infomap |
Farage, C., Edler, D., Eklöf, A., Rosvall, M., Pilosof, S |
Ecology, Methods and Software |
Methods in Ecology and Evolution |
Research article |
2021 |
Link |
Edler, D. |
Climate change policies and agendas: Facing implementation challenges and guiding responses |
Alves, F., Leal Filho, W., Casaleiro, P., Nagy, G.J., Diaz, H., Al-Amin, A.Q., de Andrade, J.B.S.O., Hurlbert, M., Farooq, H., Klavins, M., Saroar, M. |
Climate change |
Environmental Science & Policy |
Research article |
2020 |
Link |
Farooq, H. |
Preservation of Marine Biodiversity and Social Economical Sustainability in Mozambique. In: Leal Filho W., Azul A.M., Brandli L., Lange Salvia A., Wall T. (eds) |
Morgado F., Farooq H., Soares A. |
Biodiversity, Socioeconommics, |
Partnerships for the Goals |
Book chapter |
2020 |
Link |
Farooq, H. |
Historical chemical annotations of Cinchona bark collections are comparable to results from current day high-pressure liquid chromatography technologies |
Canales, N.A., Nikolaj T., Hansen, G., Cornett, C., Walker, K., Driver, F., Antonelli, A., Maldonado, C., Nesbitt, M., Barnes, C.J., Rønsted, N. |
Methods and Tools, Plants |
Journal of Ethnopharmacology |
Research article |
2020 |
Link |
Canales, N.A., Antonelli, A. |
Transitions between biomes are common and directional in Bombacoideae (Malvaceae) |
Carvalho-Sobrinho, J.G., Pennington, R.T., Queiroz, L.P., Alcantara, S., Baum, D.A., Bacon, C.D., Antonelli, A. |
Biogeography, Neotropics, Palaeotropics, Plants |
Journal of Biogeography |
Research article |
2020 |
Link |
Antonelli, A. |
Unravelling the phylogenomic relationships of the most diverse African palm genus Raphia (Calamoideae, Arecaceae) |
Helmstetter, A.J., Kamga, S.M., Bethune, K., Lautenschläger, T., Zizka, A., Bacon, C.D., Wieringa, J.J., Stauffer, F., Antonelli, A., Sonké, B., Couvreur, T.L.P. |
Africa, Plants, Systematics |
Plants |
Research article |
2020 |
Link |
Antonelli, A. |
Endemism patterns are scale dependent |
Daru, B.H., Farooq, H., Antonelli, A., Faurby, S. |
Animals, Global |
Nature Communications |
Research article |
2020 |
Link |
Farooq, H., Antonelli, A. |
Advancing biodiversity assessments with environmental DNA: Long-read technologies help reveal the drivers of Amazonian fungal diversity |
Ritter, C.D., Dunthorn, M., Anslan, S., de Lima, V.X., Tedersoo, L., Nilsson, R.H., Antonelli, A. |
Ecology, Fungi, Microorganisms, Neotropics |
Ecology and Evolution |
Research article |
2020 |
Link |
Antonelli, A. |
Selective extinction against redundant species buffers functional diversity |
Pimiento, C., Bacon, C.D., Silvestro, D., Hendy, A., Jaramillo, C., Zizka, A., Meyer, X., Antonelli, A. |
Animals, Ecology, Palaeontology |
Proceedings of the Royal Society B: Biological Sciences |
Research article |
2020 |
Link |
Antonelli, A. |
Pollinators drive floral evolution in an Atlantic Forest genus |
Neves, B., Kessous, I.M., Moura, R.L., Couto, D.R., Zanella, C.M., Antonelli, A., Bacon, C.D., Salgueiro, F., Costa, A.F. |
Ecology, Neotropics, Plants |
AoB PLANTS |
Research article |
2020 |
Link |
Neves, B., Antonelli, A. |
Plastid phylogenomics resolves ambiguous relationships within the orchid family and provides a solid timeframe for biogeography and macroevolution |
Sanchez, M.A.S., Perez-Escobar, O.A., Bogarin, D., Torres, M.F., Yela, A.C.A., Galvis, J.E.A., Hall, C.F., de Barros, F., Pinheiro, F., Dodsworth, S., Chase, M.W., Antonelli, A., Arias, T. |
Plants, Systematics |
Scientific Reports |
Research article |
2021 |
Link |
Torres-Jimenez, M.F., Antonelli, A. |
Toward unifying global hotspots of wild and domesticated biodiversity |
Pironon, S., Borrell, J.S., Ondo, I., Douglas, R., Phillips, C., Khoury, C.K., Kantar, M., Fumia, N., Soto Gomez, M., Viruel, J., Govaerts, R., Forest, F., Antonelli, A. |
Biogeography, Global, Plants |
Plants |
Research article |
2020 |
Link |
Ondo, I., Antonelli, A. |
Trade-off between seed dispersal in space and time |
Chen, S-C., Antonelli, A., Udayangani, L. |
Ecology, Global, Plants |
Ecology Letters |
Research article |
2020 |
Link |
Antonelli, A. |
The past and future human impact on mammalian diversity |
Andermann, T., Faurby, S., Turvey, S.T., Antonelli, A., Silvestro, D. |
Animals, Global, Palaeontology |
Science Advances |
Research article |
2020 |
Link |
Andermann, T., Antonelli, A. |
No one-size-fits-all solution to clean GBIF |
Zizka, A., Antunes Carvalho, F., Calvente, A., Rocio Baez-Lizarazo, M., Cabral, A., Coelho, J.F.R., Colli-Silva, M., Fantinati, M.R., Fernandes, M.F., Ferreira-Araújo, T., Gondim Lambert Moreira, F., Santos, N.M.C., Santos, T.A.B., dos Santos-Costa, R.C., Serrano, F.C., Alves da Silva, A.P., de Souza Soares, A., Cavalcante de Souza, P.G., Calisto Tomaz, E., Vale, V.F., Vieira, T.L., Antonelli, A. |
Animals, Biogeography, Global, Neotropics, Plants |
PeerJ |
Research article |
2020 |
Link |
Antonelli, A. |
Disproportionate extinction of South American mammals drove the asymmetry of the Great American Biotic Interchange |
Carrillo, J.D., Faurby, S., Silvestro, D., Zizka, A., Jaramillo, C., Bacon, C.D., Antonelli, A. |
Animals, Biogeography, Palaeontology |
Proceedings of the National Academy of Sciences of the USA |
Research article |
2020 |
Link |
Antonelli, A. |
The rise of angiosperms pushed conifers to decline during global cooling |
Condamine, F.L., Silvestro, D., Koppelhus, E.B., Antonelli, A. |
Global, Plants |
Proceedings of the National Academy of Sciences of the USA |
Research article |
2020 |
Link |
Antonelli, A. |
Brain expansion in early hominins predicts carnivore extinctions in East Africa |
Faurby, S., Silvestro, D., Werdelin, L., Antonelli, A. |
Animals, Africa, Palaeontology |
Ecology Letters |
Research article |
2020 |
Link |
Faurby, S., Silvestro, D.., Antonelli, A. |
The pitfalls of biodiversity proxies: Differences in richness patterns of birds, trees and understudied diversity across Amazonia |
Ritter, C.D., Faurby, S., Bennett, D.J., Naka, L.N., ter Steege, H., Zizka, A., Haenel, Q., Nilsson, R.H., Antonelli, A. |
Global, Microorganisms |
Nature Scientific Reports |
Research article |
2019 |
Link |
Faurby, S., Antonelli, A. |
Wege: A new metric for ranking locations for biodiversity conservation |
Farooq, H., Anderson, J., Belluardo, F., Nanvonamuquitxo, C., Bennett, D., Moat, J., Soares, A., Faurby, S., Antonelli, A. |
Africa, Animals, Methods and Tools |
Diversity and Distributions |
Research article |
2020 |
Link |
Farooq, H., Faurby, S., Antonelli, A. |
Megafauna decline have reduced pathogen dispersal which may have increased emergent infectious diseases |
Doughty, C.E., Prys‐Jones, T.O., Faurby, S., Abraham, A.J., Hepp, C., Leshyk, V., Fofanov, V.Y., Nieto, N.C., Svenning, J.C., Galetti, M. |
Animals, Microorganisms, Ecology, Global |
Ecography |
Research article |
2020 |
Link |
Faurby, S. |
Trophic rewilding presents regionally specific opportunities for mitigating climate change |
Sandom, C.J., Middleton, O., Lundgren, E., Rowan, J., Schowanek, S.D., Svenning, J.C., Faurby, S. |
Animals, Ecology |
Philosophical Transactions of the Royal Society B |
Research article |
2020 |
Link |
Faurby, S. |
Rock star flowers: Conchocarpus hendrixii (Galipeinae, Rutaceae), a new species from Eastern Brazil with notes on its phylogenetic position in the genus |
Groppo, M., Costa, I.G., Bruniera, C.P., Ferreira, C., Afonso, L., Maeoka, H.M., Dutra, F.V., Gasparino, E.C., Ferreira, P.D.L. |
Neotropics, Plants, Systematics |
Phytotaxa |
Research article |
2019 |
Link |
Ferreira, P.D.L. |
Climate resilience in marine protected areas and the ‘Protection Paradox’ |
Bates, A.E., Cooke, R., Duncan, M.I., Edgar, G.J., Bruno, J.F., Benedetti-Cecchi, L., Côté, I.M., Lefcheck, J.S., Costello, M.J., Barrett, N., Bird, T.J., Fenberg, P.B., Stuart-Smith, R.D. |
Ecology |
Biological Conservation |
Research article |
2019 |
Link |
Cooke, R. |
iucn_sim: A new program to simulate future extinctions based on IUCN threat status |
Andermann, T., Faurby, S., Cooke, R., Silvestro, D., Antonelli, A. |
Methods and Software |
Ecography |
Research article |
2020 |
Link |
Andermann, T., Faurby, S., Cooke, R., Antonelli, A. |
Phylogenomics and biogeography of the world's thrushes (Aves, Turdus): new evidence for a more parsimonious evolutionary history |
Batista, R., Olsson, U., Andermann, T., Aleixo, A., Ribas, C.C., Antonelli, A. |
Animals, Biogeography, Global |
Proceedings of the Royal Society B |
Research article |
2020 |
Link |
Andermann, T., Antonelli, A. |
Museums and cradles of diversity are geographically coincident for narrowly distributed Neotropical snakes |
Azevedo, J., Guedes, T.B., Nogueira, C.C., Passos, P., Sawaya, R.J., Prudente, A.L.C., Barbo, F.E., Strüssmann, C., Franco, F.L., Arzamendia, V., Giraudo, A.R., Argôlo, A.J.S., Jansen, M., Zaher, H., Tonini, J.F.R., Faurby, S., Antonelli, A. |
Animals, Biogeography, Neotropics |
Ecography |
Research article |
2019 |
Link |
Azevedo, J., Faurby, S., Antonelli, A. |
An Integrated Approach to Delimit Species in the Puzzling Atractus emmeli Complex (Serpentes: Dipsadidae) |
Passos, P., Azevedo, J., Nogueira, C.C., Fernandes, R., Sawaya, R.J. |
Animals, Ecology, Neotropics, Taxonomy |
Herpetological Monographs |
Research article |
2019 |
Link |
Azevedo, J. |
Atlas of Brazilian Snakes: Verified Point-Locality Maps to Mitigate the Wallacean Shortfall in a Megadiverse Snake Fauna |
Nogueira, C.C., Argôlo, A.J.S., Arzamendia, V., Azevedo, J., Barbo, F.E., Bérnils, R.S., Bolochio, B.E., Borges-Martins, M., Brasil-Godinho, M., Braz, H., Buononato, M.A., Cisneros-Heredia, D.F., Colli, G.R., Costa, H.C., Franco, F.L., Giraudo, A., Gonzalez, R.C., Guedes, T., Hoogmoed, M.S., Marques, O.A.V., Montingelli, G.G., Passos, P., Prudente, A.L.C., Rivas, G.A., Sanchez, P.M., Serrano, P.C., Silva, N.J., Strüssmann, C., Vieira-Alencar, J.P.S., Zaher, H., Sawaya, R.J., Martins, M. |
Animals, Biogeography, Neotropics |
South American Journal of Herpetology |
Research article |
2019 |
Link |
Azevedo, J. |
Biogeography and conservation status of the pineapple family (Bromeliaceae) |
Zizka, A., Azevedo, J., Leme, E., Neves, B., Ferreira da Costa, A., Caceres, D., Zizka, G. |
Biogeography, Neotropics, Plants |
Search Results Web results Diversity and Distributions |
Research article |
2020 |
Link |
Azevedo, J., Neves, B. |
Geographic range extension of Speke's Hinge-back Tortoise Kinixys spekii Gray, 1863 |
Ihlow, F., Farooq, H., Gvoždík, V., Hofmeyr, M.D., Conradie, W., Campbell, P.D., Harvey, J., Verburgt, L., Fritz, U. |
Africa, Animals, Biogeography |
Amphibian and Reptile Conservation |
Research article |
2019 |
Link |
Farooq, H. |
Climate change policies and agendas: Facing implementation challenges and guiding responses |
Leal Filho, W, Casaleiro, P, Nagy, G.J., Diaz, H, Al-Amin, A, de Andrade Guerra, J.B.S.O, Hurlbert, M, Farooq, H., Klavins, M, Saroar, M, Lorencova, E.K., Jain, S, Soares, A, Morgado, F, O’Hare, P, Wolf, F, Azeiteiro, U.M. |
Global |
Environmental Science & Policy |
Research article |
2019 |
Link |
Farooq, H |
Nutrient scarcity as a selective pressure for mast seeding |
Fernández-Martínez, M, Pearse, I, Sardans, J, Sayol, F, Koenig, W.D., LaMontagne, J.M., Bogdziewicz, M., Collalti, A., Hacket-Pain, A., Vacchiano, G., Espelta, J.M., Peñuelas, J., Janssens, I.A. |
Ecology, Global, Plants, |
Nature Plants |
Research article |
2019 |
Link |
Sayol, F. |
Larger brains spur species diversification in birds |
Sayol, F., Lapiedra, O., Ducatez, S., Sol, D. |
Animals, Ecology, Global, |
Evolution |
Research article |
2019 |
Link |
Sayol, F. |
A quantitative workflow for modeling diversification in material culture |
Gjesfjeld, E., Silvestro, D., Chang, J., Koch, B., Foster, J.G., Alfaro, M.E. |
Methods and Tools |
PLOS ONE |
Research article |
2020 |
Link |
Silvestro, D. |
outsider: Install and run programs, outside of R, inside of R |
Bennett, D.J., Hettling, H., Silvestro, D., Vos, R., Antonelli, A. |
Methods and Software |
Journal of Open Source Software |
Research article |
2020 |
Link |
Bennett, D.J., Silvestro, D., Antonelli, A. |
Slowly but surely: gradual diversification and phenotypic evolution in the hyper-diverse tree fern family Cyatheaceae |
Loiseau, O., Weigand, A., Noben, S., Rolland, J., Silvestro, D., Kessler, M., Lehnert, M., Salamin, N. |
Ecology, Plants |
Annals of Botany |
Research article |
2020 |
Link |
Silvestro, D. |
sampbias, a method for quantifying geographic sampling biases in species distribution data |
Zizka, A., Antonelli, A., Silvestro, D. |
Methods and Software |
Ecography |
Research article |
2020 |
Link |
Zizka, A., Antonelli, A., Silvestro, D. |
Seeing the Wood through the Trees: The Current State of Higher Systematics in the Strepsirhini |
Masters, J.C., Silvestro, D., Génin, F., DelPero, M. |
Animals, Africa, Palaeontology |
Folia Primatologica |
Research article |
2013 |
Link |
Silvestro, D. |
Drivers of bromeliad leaf and floral bract variation across a latitudinal gradient in the Atlantic Forest |
Neves, B., Zanella, C.M., Kessous, I.M., Uribbe, F.P., Salgueiro, F., Bered, F., Antonelli, A., Bacon, C.D., Costa, A.F. |
Ecology, Neotropics, Plants |
Journal of Biogeography |
Research article |
2019 |
Link |
Neves, B., Antonelli, A., Bacon, C.D. |
Five new species of dictyostelid social amoebae (Amoebozoa) from Thailand |
Vadell, E., Cavender, J.C., Landolt, J.C., Perrigo, A.L., Liu, P., Stephenson, S.L. |
Systematics, Microorganisms |
BMC evolutionary biology |
Research article |
2018 |
Link |
Perrigo, A. |
Trophic rewilding presents regionally specific opportunities for mitigating climate change |
Sandom, C.J., Middleton, O., Lundgren, E., Rowan, J., Schowanek, S.D., Svenning, J.C., Faurby, S. |
Animals, Biogeography, Global |
Philosophical Transactions B: Biological Science |
Research article |
2019 |
Link |
Faurby, S. |
Mechanistic macroecology: exploring the drivers of latitudinal variation in terrestrial body size in a General Ecosystem Model |
Harfoot, M.B.J., Abraham, A., Tittensor, D.P., Costa, G.C., Faurby, S., Feldman, A., Itescu, Y., Meiri, S., Morales-Castilla, I., Oliveira, B.F., Purves, D. |
Animals, Biogeography, Global, Methods and Tools |
bioRxiv |
Research article |
2019 |
Link |
Faurby, S. |
Dispersal ability predicts evolutionary success among mammalian carnivores |
Faurby, S., Werdelin, L., Antonelli, A. |
Animals, Biogeography |
bioRxiv |
Research article |
2019 |
Link |
Faurby, S., Antonelli, A. |
The use of museum skins for genomic analyses of temporal genetic diversity in wild species |
Stronen, A.V., Iacolina, L., Pertoldi, C., Kusza, S., Hulva, P., Dykyy, I., Kojola, I., Faurby, S. |
Animals |
Conservation Genetics Resources |
Research article |
2018 |
Link |
Faurby, S. |
Diversidade linguística e preservação da biodiversidade: “ckeck list” de peixes de interesse comercial da Baía de Pemba (Moçambique) em línguas locais (“Makhuwa” e “Kimuane”) |
orgado, F., Simão, C., Farooq, H., de Fátima Alves, M., Soares, A. |
Animals, Africa |
Revista Captar: Ciência e Ambiente para Todos |
Research article |
2019 |
Link |
Farooq, H. |
Caracterização dos desembarques da pesca na Baia de Pemba: centros de pesca de Pemba e Pemba–Metuge (Norte Moçambique) |
Bilika, F., Farooq, H., Alfredo, A.C., Soares, A., Morgado, F. |
Animals, Africa |
Revista Captar: Ciência e Ambiente para Todos |
Research article |
2019 |
Link |
Farooq, H. |
Composição específica da comunidade de peixes da Baía de Pemba (Norte Moçambique) |
Bilika, F., Farooq, H., Simão, C., Soares, A., Morgado, F. |
Animals, Africa |
Revista Captar: Ciência e Ambiente para Todos |
Research article |
2019 |
Link |
Farooq, H. |
The Allemann collection from the Santa Cruz Formation (late early Miocene), Argentina, in Zurich, Switzerland |
Zurita-Altamirano, D., Buffetaut, E., Forasiepi, A.M., Kramarz, A., Carrillo, J.D., Aguirre-Fernández, G., Carlini, A.A., Scheyer, T.M., Sánchez-Villagra, M.R. |
Animals, Palaeontology |
Swiss Journal of Palaeontology |
Research article |
2019 |
Link |
Carrillo, J.D. |
Hace tiempo. Un viaje paleontológico ilustrado por Colombia |
Jaramillo, C., Sánchez-Villagra, M., Ochoa, F.L., Arenas-Castro, H., Narváez-Gómez, J.P., González, M.A., Cárdenas-Rozo, A.L., Montes, C., Bayona, G., Hoyos, N., Restrepo, J.C., Ibáñez-Mejía, M., Luque, J., Martínez, C., Herrera, F., Suárez, C., Moreno-Bernal, J.W., Jiménez-Lara, K., Carrillo, J.D., Moreno, F., Escobar, J., Pimiento, C., Cadena, E., Romero, I., Rincón, A.F., Carvalho, M.R., Baquero Castro, C., Martín J.G. |
Animals, Biogeography, Neotropics, Palaeontology |
Instituto de Investigación de Recursos Biológicos Alexander von Humboldt, Instituto Smithsonian de Investigaciones Tropicales |
Book |
2018 |
Link |
Carrillo, J.D. |
The Neogene Record of Northern South American Native Ungulates |
Carrillo, J.D., Amson, E., Jaramillo, C., Sánchez, R., Quiroz, L., Cuartas, C., Rincón, A.F., Sánchez-Villagra, M.R. |
Animals, Biogeography, Neotropics, Palaeontology |
Smithsonian Institution Scholarly Press |
Book |
2018 |
Link |
Carrillo, J.D. |
Niche conservatism drives a global discrepancy in palm species richness between seasonally dry and moist habitats |
Cássia‐Silva, C., Freitas, C.G., Alves, D.M., Bacon, C.D., Collevatti, R.G. |
Biogeography, Ecology, Plants |
Global Ecology and Biogeography |
Research article |
2019 |
Link |
Bacon, C.D. |
Travel for two |
Bacon, C.D. |
Global |
Science |
Popular science |
2019 |
Link |
Bacon, C.D. |
Targeted capture of hundreds of nuclear genes unravels phylogenetic relationships of the diverse Neotropical palm tribe Geonomateae |
Loiseau, O., Olivares, I., Paris, M., de La Harpe, M., Weigand, A., Koubinova, D., Rolland, J., Bacon, C.D., Balslev, H., Borchsenius, F., Cano, A., Couvreur, T.L.P., Delnatte, C., Fardin, F., Gayot, M., Mejía, F., Mota-Machado, T., Perret, M., Roncal, J., Sanin, M.J., Stauffer, F., Lexer, C., Kessler, M., Salamin, N. |
Plants, Systematics |
Frontiers in plant science |
Research article |
2019 |
Link |
Bacon, C.D. |
A guide to carrying out a phylogenomic target sequence capture project |
Andermann, T., Torres-Jimenez, M.F., Matos-Maraví, P., Batista, R., Blanco-Pastor, J.L., Gustafsson, A.L.S., Kistler, L., Liberal, I.M., Oxelman, B., Bacon, C.D., Antonelli, A. |
Methods and Tools |
Frontiers in Genetics |
Overview article |
2020 |
Link |
Andermann, T., Torres-Jimenez, M.F., Matos-Maraví, P., Batista, R., Bacon, C.D., Antonelli, A. |
Building mountain biodiversity: Geological and evolutionary processes |
Rahbek, C., Borregaard, M.K., Antonelli, A., Colwell, R.K., Holt, B.G., Nogues-Bravo, D., Rasmussen, C.M., Richardson, K., Rosing, M.T., Whittaker, R.J., Fjeldså, J. |
Biogeography, Global |
Science |
Overview article |
2019 |
Link |
Antonelli, A. |
Orthologous nuclear markers and new transcriptomes that broadly cover the phylogenetic diversity of Acanthaceae |
Morais, E.B., Schönenberger, J., Conti, E., Antonelli, A., Szövényi, P. |
Plants |
Applications in Plant Sciences |
Research article |
2019 |
Link |
Antonelli, A. |
Advanced understanding of phylogenetic relationships, morphological evolution and biogeographic history of the mega-diverse plant genus Myrcia and its relatives (Myrtaceae: Myrteae) |
Amorim, B.S., Vasconcelos, T.N., Souza, G., Alves, M., Antonelli, A., Lucas, E. |
Biogeography, Neotropics, Plants, |
Molecular phylogenetics and evolution |
Research article |
2019 |
Link |
Antonelli, A. |
Tree plantations: we must get them right |
Antonelli, A. |
Global, Plants |
Nature |
Popular science |
2019 |
Link |
Antonelli, A. |
Linking democracy and biodiversity conservation: Empirical evidence and research gaps |
Rydén, O., Zizka, A., Jagers, S.C., Lindberg, S.I., Antonelli, A. |
Global |
Ambio |
Overview article |
2019 |
Link |
Antonelli, A. |
Human activity is altering the world’s zoogeographical regions |
Bernardo‐Madrid, R., Calatayud, J., González‐Suárez, M., Rosvall, M., Lucas, P.M., Rueda, M., Antonelli, A., Revilla, E. |
Animals, Global |
Ecology letters |
Research article |
2019 |
Link |
Antonelli, A. |
Why mountains matter for biodiversity |
Perrigo, A., Hoorn, C., Antonelli, A. |
Biogeography, Global |
Journal of Biogeography |
Overview article |
2019 |
Link |
Perrigo, A., Hoorn, C., Antonelli, A. |
Ancient polyploidy and genome evolution in palms |
Barrett, C.F., McKain, M.R., Sinn, B.T., Ge, X.J., Zhang, Y., Antonelli, A., Bacon, C.D. |
Plants |
Genome biology and evolution |
Research article |
2019 |
Link |
Antonelli, A., Bacon, C.D. |
The Global Museum: natural history collections and the future of evolutionary biology and public education |
Bakker, F.T., Antonelli, A., Clarke, J., Cook, J.A., Edwards, S.V., Ericson, P.G., Faurby, S., Ferrand, N., Gelang, M., Gillespie, R.G., Irestedt, M., Lundin, K., Larsson, E., Matos-Maraví, P., Müller, J., von Proschwitz, T., Roderick, G.K., Schliep, A., Wahlberg, N., Wiedenhoeft, J., Källersjö, M. |
Global |
PeerJ |
Overview article |
2020 |
Link |
Antonelli, A., Faurby, S., Matos-Maraví, P. |
The Impact of Mutualisms on Species Richness |
Chomicki, G., Weber, M., Antonelli, A., Bascompte, J., Kiers, E.T. |
Animals, Ecology, Plants |
Trends in ecology & evolution |
Overview article |
2019 |
Link |
Antonelli, A. |
Towards a dynamic list of Amazonian tree species |
Ter Steege, H., de Oliveira, S.M., Pitman, N.C., Sabatier, D., Antonelli, A., Andino, J.E.G., Aymard, G.A., Salomão, R.P. |
Methods and Tools, Neotropics, Plants |
Nature Scientific Reports |
Research article |
2019 |
Link |
Antonelli, A. |
raxmlGUI 2.0 beta: a graphical interface and toolkit for phylogenetic analyses using RAxML |
Edler, D., Klein, J., Antonelli, A., Silvestro, D. |
Methods and Software |
Methods in Ecology and Evolution |
Research article |
2020 |
Link |
Edler, D., Antonelli, A., Silvestro, D. |
The origin and diversification of the hyperdiverse flora in the Chocó biogeographic region |
Pérez-Escobar, O.A., Lucas, E.J., Jaramillo, C., Monro, A., Morris, S.K., Bogarín, D., Greer, D., Dodsworth, S., Antonelli, A. |
Biogeography, Neotropics, Plants |
Frontiers in Plant Science |
Overview article |
2019 |
Link |
Pérez-Escobar, O.A., Antonelli, A. |
The effects of climate change on the distribution of South American antbirds (Thamnophilus punctatus complex) as affected by niche divergences and contact zone interactions between species |
da Silva, E.A., de Araujo, H.F.P., Aleixo, A., Antonelli, A., Fernandes, A.M. |
Biogeography, Animals, Neotropics |
Journal of Ornithology |
Research article |
2019 |
Link |
Antonelli, A. |
Mesoamerica is a cradle and the Brazilian Atlantic Forest is a museum of Neotropical butterfly diversity (Lepidoptera: Nymphalidae: Brassolini) |
Matos-Maraví, P., Wahlberg, N., Freitas, A.V.L., DeVries, P.J., Antonelli, A., Penz, C. |
Biogeography, Animals, Neotropics |
Biological Journal of the Linnean Society |
Research article |
2021 |
Link |
Matos-Maraví, P., Antonelli, A. |
Make EU trade with Brazil sustainable |
Virah-Sawmy, M., Balmford, A., Kuemmerle, T., Antonelli, A., Hochirch, A., Vira, B., Crona, B., Sindičić, M., Persson, M., Dara, A., Rilović, A. |
Global |
Science |
Popular science |
2019 |
PDF |
Antonelli, A. |
Could coastal plants in western Amazonia be relicts of past marine incursions? |
Bernal, R., Bacon, C.D., Balslev, H., Hoorn, C., Bourlat, S.J., Tuomisto, H., Salamanca, S., van Manen, M.T., Romero, I., Sepulchre, P., Antonelli, A. |
Biogeography, Plants, Neotropics |
Journal of Biogeography |
Overview article |
2019 |
Link |
Bacon, C.D., Hoorn, C., Antonelli, A. |
Species limits in butterflies (Lepidoptera: Nymphalidae): Reconciling classical taxonomy with the multispecies coalescent |
Matos-Maraví, P., Wahlberg, N., Antonelli, A., Penz, C. M. |
Systematics, Animals, Methods and Tools |
Systematic Entomology |
Research article |
2019 |
Link |
Matos-Maraví, P., Antonelli, A., |
Species limits, geographical distribution and genetic diversity in Johannesteijsmannia (Arecaceae) |
Bacon, C.D., Look, S.L., Gutiérrez–Pinto, N., Antonelli, A., Tan, H.T., Kumar, P.P., Guan, S.L., Dransfield, J., Baker, W.J. |
Plants, Biogeography |
Botanical Journal of the Linnean Society |
Research article |
2016 |
Link |
Bacon, C.D., Antonelli, A., |
Toward a self-updating platform for estimating rates of speciation and migration, ages, and relationships of taxa |
Antonelli, A., Hettling, H., Condamine, F.L., Vos, K., Nilsson, R.H., Sanderson, M.J., Sauquet, H., Scharn, R., Silvestro, D., Töpel, M., Bacon, C.D. |
Methods and Software, Methods and Tools |
Systematic Biology |
Overview article |
2017 |
Link |
Antonelli, A., Silvestro, D., Bacon, C.D. |
Rivers shape population genetic structure in Mauritia flexuosa (Arecaceae) |
Sander, N.L., Pérez‐Zavala, F., Da Silva, C.J., Arruda, J.C., Pulido, M.T., Barelli, M.A., Rossi, A.B., Viana, A.P., Boechat, M.S., Bacon, C.D., Cibrián‐Jaramillo, A. |
Plants, Neotropics, Biogeography |
Ecology and Evolution |
Research article |
2018 |
Link |
Bacon, C.D. |
Phylogenomics, biogeography, and evolution in the American palm genus Brahea |
Barrett, C., Sinn, B., King, L., Medina, J., Bacon, C.D., Lahmeyer, S., Hodel, D. |
Plants, Neotropics, Biogeography |
Botanical Journal of the Linnean Society |
Research article |
2019 |
Link |
Bacon, C.D. |
Adjacency and Area Explain Species Bioregional Shifts in Neotropical Palms |
Freitas, C.G.F., Bacon, C.D., Souza-Neto, A.C.S.N., Collevatti, R.G.C. |
Plants, Neotropics |
Frontiers in Plant Science |
Research article |
2019 |
Link |
Bacon, C.D. |
Challenging transitions |
Wasalathanthri, N.D., Zaidi, S.S.E.A., Mahrt, E., Srivastava, S., Yu, K.H., Johansson, K.S., Li, F., Torres-Jimenez, M.F., Lo, C., Allareddy, V., Romero-Molina, C. |
Global |
Science |
Popular science |
2019 |
Link |
Bacon, C.D., Torres-Jimenez, M.F. |
The use of chloroplast genome sequences to solve phylogenetic incongruences in Polystachya Hook (Orchidaceae Juss) |
de Abreu, N.L., Alves, R.J.V., Cardoso, S.R.S., Bertrand, Y.J., Sousa, F., Hall, C.F., Pfeil, B.E., Antonelli, A. |
Plants, Neotropics |
PeerJ |
Research article |
2018 |
Link |
Antonelli, A. |
The roles of dispersal and mass extinction in shaping palm diversity across the Caribbean |
Cano, Á., Bacon, C.D., Stauffer, F.W., Antonelli, A., Serrano‐Serrano, M.L., Perret, M. |
Plants, Neotropics, Biogeography |
Journal of Biogeography |
Research article |
2018 |
Link |
Bacon, C.D., Antonelli, A. |
Improved estimation of macroevolutionary rates from fossil data using a Bayesian framework |
Silvestro, D., Antonelli, A., Salamin, N., Meyer, X. |
Methods and Tools |
bioRxiv |
Overview article |
2018 |
Link |
Silvestro, D., Antonelli, A. |
The Tepuis of the Guiana Highlands |
Huber, O., Prance, G.T., Kroonenberg, S.B., Antonelli, A. |
Neotropics |
Mountains, Climate and Biodiversity |
Book chapter |
2018 |
Link |
Antonelli, A. |
Locality or habitat? Exploring predictors of biodiversity in Amazonia |
Ritter, C.D., Zizka, A., Barnes, C., Nilsson, R.H., Roger, F., Antonelli, A. |
Neotropics |
Ecography |
Research article |
2018 |
Link |
Antonelli, A. |
Early arrival and climatically-linked geographic expansion of New World monkeys from tiny African ancestors |
Silvestro, D., Tejedor, M.F., Serrano-Serrano, M.L., Loiseau, O., Rossier, V., Rolland, J., Zizka, A., Höhna, S., Antonelli, A., Salamin, N. |
Animals, Global, Biogeography |
Systematic Biology |
Research article |
2018 |
Link |
Silvestro, D., Antonelli, A. |
Iriarteeae palms tracked the uplift of Andean Cordilleras |
Bacon, C.D., Velásquez‐Puentes, F.J., Hoorn, C., Antonelli, A. |
Plants, Neotropics |
Journal of Biogeography |
Research article |
2018 |
Link |
Bacon, C.D., Antonelli, A. |
A novel approach to study the morphology and chemistry of pollen in a phylogenetic context, applied to the halophytic taxon Nitraria L.(Nitrariaceae) |
Woutersen, A., Jardine, P.E., Bogotá-Angel, R.G., Zhang, H.X., Silvestro, D., Antonelli, A., Gogna, E., Erkens, R.H., Gosling, W.D., Dupont-Nivet, G., Hoorn, C. |
Global, Plants, Methods and Tools |
PeerJ |
Research article |
2018 |
Link |
Silvestro, D., Antonelli, A. |
High-throughput metabarcoding reveals the effect of physicochemical soil properties on soil and litter biodiversity and community turnover across Amazonia |
Ritter, C.D., Zizka, A., Roger, F., Tuomisto, H., Barnes, C., Nilsson, R.H., Antonelli, A. |
Neotropics |
PeerJ |
Research article |
2018 |
Link |
Antonelli, A. |
Geological and climatic influences on mountain biodiversity |
Antonelli, A., Kissling, W.D., Flantua, S.G., Bermúdez, M.A., Mulch, A., Muellner-Riehl, A.N., Kreft, H., Linder, H.P., Badgley, C., Fjeldså, J., Fritz, S.A. |
Global, Biogeography |
Nature Geoscience |
Research article |
2018 |
Link |
Antonelli, A. |
Evidence for mtDNA capture in the jacamar Galbula leucogastra/chalcothorax species-complex and insights on the evolution of white-sand ecosystems in the Amazon basin |
Ferreira, M., Fernandes, A.M., Aleixo, A., Antonelli, A., Olsson, U., Bates, J.M., Cracraft, J., Ribas, C.C. |
Systematics, Biogeography, Animals |
Molecular Phylogenetics and Evolution |
Research article |
2018 |
Link |
Antonelli, A. |
An introduction to plant phylogenomics with a focus on palms |
Barrett, C.F., Bacon, C.D., Antonelli, A., Cano, Á., Hofmann, T. |
Plants |
Botanical Journal of the Linnean Society |
Overview article |
2016 |
Link |
Bacon, C.D., Antonelli, A. |
SECAPR—a bioinformatics pipeline for the rapid and user-friendly processing of targeted enriched Illumina sequences, from raw reads to alignments |
Andermann, T., Cano, Á., Zizka, A., Bacon, C.D., Antonelli, A. |
Methods and Software |
PeerJ |
Overview article |
2018 |
Link |
Andermann, T., Bacon, C.D., Antonelli, A. |
Conceptual and empirical advances in Neotropical biodiversity research |
Antonelli, A., Ariza, M., Albert, J., Andermann, T., Azevedo, J., Bacon, C.D., Faurby, S., Guedes, T., Hoorn, C., Lohmann, L.G., Matos-Maraví, P. |
Global, Biogeography |
PeerJ |
Overview article |
2018 |
Link |
Antonelli, A., Andermann, T., Azevedo, J., Bacon, C.D., Faurby, S., Matos-Maraví, P. |
Embracing heterogeneity: Building the Tree of Life and the future of phylogenomics. |
Bravo, G.A., Antonelli, A., Bacon, C.D., Bartoszek, K., Blom, M., Huynh, S., Jones, G., Knowles, L., Lamichhaney, S., Marcussen, T., Morlon, H., Nakhleh, L., Oxelman, B., Pfeil, B., Schliep, A., Wahlberg, N., Werneck, F., Wiedenhoeft, J., Willows-Munro, S., Edwards, S.V. |
Methods and Tools |
PeerJ |
Overview article |
2019 |
Link |
Antonelli, A., Bacon, C.D. |
Biodiversity assessments in the 21st century: The potential of insect traps to complement environmental samples for estimating eukaryotic and prokaryotic diversity using high-throughput DNA metabarcoding. Genome. |
Ritter, C.D., Häggqvist, S., Karlsson, D., Sääksjärvi, I.E., Muasya, M., Nilsson, R.H., Antonelli, A. |
Global, Biogeography |
Genome |
Research article |
2019 |
Link |
Antonelli, A. |
CoordinateCleaner: standardized cleaning of occurrence records from biological collection databases. |
Zizka, A., Silvestro, D., Andermann, T., Azevedo, J., Duarte Ritter, C., Edler, D., Farooq, H., Herdean, A., Ariza, M., Scharn, R., Svanteson, S., Wengström, N., Zizka, V., Antonelli, A. |
Global, Biogeography, Methods and Tools, Methods and Software |
Methods Ecol Evol |
Research article |
2019 |
Link |
Zizka, A., Silvestro, D., Andermann, T., Duarte Ritter, C., Edler, D., Farooq, H., Antonelli, A. |
Soil fertility and flood regime are correlated with phylogenetic structure of Amazonian palms |
Muscarella, R., Bacon, C.D., Faurby, S., Antonelli, A., Kristiansen, S.M., Svenning, J.C., Balslev, H. |
Plants, Neotropics, Ecology |
Annals of Botany |
Research article |
2018 |
Link |
Bacon, C.D., Faurby, S., Antonelli, A. |
PHYLACINE 1.2: The phylogenetic atlas of mammal macroecology |
Faurby, S., Davis, M., Pedersen, R., Schowanek, S., Antonelli, A., Svenning, J.C. |
Global, Animals |
Ecology |
Research article |
2018 |
Link |
Faurby, S., Antonelli, A. |
Mammal diversity will take millions of years to recover from the current biodiversity crisis |
Davis, M., Faurby, S., Svenning, J.C. |
Global, Animals |
Proceedings of the National Academy of Sciences USA |
Research article |
2018 |
Link |
Faurby, S. |
Taxon cycle predictions supported by model‐based inference in Indo‐Pacific trap‐jaw ants (Hymenoptera: Formicidae: Odontomachus) |
Matos-Maraví, P., Matzke, N., Larabee, F.J., Clouse, R.M., Wheeler, W.C., Sorger, D.M., Suarez, A.V., Janda, M. |
Systematics, Biogeography, Animals, Palaeotropics |
Molecular Ecology |
Research article |
2018 |
Link |
Matos-Maraví, P. |
Evolutionary and ecological success is decoupled in mammals |
Faurby, S., Antonelli, A. |
Biogeography, Animals, Global |
Journal of Biogeography |
Research article |
2018 |
Link |
Faurby, S., Antonelli, A. |
To adapt or go extinct? The fate of megafaunal palm fruits under past global change |
Onstein, R.E., Baker, W.J., Couvreur, T.L.P., Faurby, S., Leonel, H.A., Svenning, J.C., Kissling, D. |
Global, Plants |
Proceedings of the Royal Society B |
Research article |
2018 |
Link |
Faurby, S. |
Comparing spatial diversification and meta-population models in the Indo-Australian Archipelago |
Descombes, P., Chalmandrier, L., Albouy, C., Sandel, B., Faurby, S., Svenning, J.C., Zimmermann, N.E., Pellissier, L. |
Biogeography, Animals |
Royal Society Open Science |
Research article |
2018 |
Link |
Faurby, S. |
restez: Create and Query a Local Copy of GenBank in R |
Bennett, D.J., Hettling, H., Silvestro, D., Vos, R., Antonelli, A. |
Methods and Tools |
Journal of Open Source Software |
Research article |
2018 |
Link |
Bennett, D.J., Silvestro, D., Antonelli, A. |
Shark and ray diversity in the Tropical America (Neotropics)—an examination of environmental and historical factors affecting diversity |
Carrillo-Briceño, J.D., Carrillo, J.D., Aguilera, O.A., Sánchez-Villagra, M.R. |
Neotropics, Biogeography, Palaeontology, Animals |
PeerJ |
Research article |
2018 |
Link |
Carrillo, J.D. |
phylotaR: An Automated Pipeline for Retrieving Orthologous DNA Sequences from GenBank in R |
Bennett, D.J., Hettling, H., Silvestro, D., Zizka, A., Bacon, C.D., Faurby, S., Vos, R.A., Antonelli, A. |
Methods and Tools |
Life |
Research article |
2018 |
Link |
Bennett, D.J., Silvestro, D., Bacon, C.D., Faurby, S., Antonelli, A. |
Amazonia is the primary source of Neotropical biodiversity |
Antonelli, A., Zizka, A., Carvalho, F.A., Scharn, R., Bacon, C.D., Silvestro, D., Condamine, F.L. |
Biogeography, Neotropics, Plants, Animals, Methods and Tools |
Proceedings of the National Academy of Sciences of the USA |
Research article |
2018 |
Link |
Antonelli, A., Bacon, C.D., Silvestro, D. |
Allele phasing greatly improves the phylogenetic utility of Ultraconserved Elements. |
Andermann, T., Fernandes, A., Olsson, U., Töpel, M., Pfeil, B., Oxelman, B., Aleixo, A., Faircloth, B.C., Antonelli, A. |
Methods and Tools, Systematics, Animals, Neotropics |
Systematic Biology |
Research article |
2018 |
Link |
Andermann, T., Antonelli, A. |
Biodiversity seen through the perspective of insects: 10 simple rules on methodological choices, common challenges, and experimental design for genomic studies. |
Matos-Maraví, P., Duarte Ritter, C., Barnes, C., Nielsen, M., Olsson, U., Wahlberg, N., Marquina, D., Sääksjärvi, I., Antonelli, A. |
Animals, Methods and Tools, Systematics |
PeerJ |
Research article |
2019 |
Link |
Matos-Maraví, P., Antonelli, A. |
Mining threatens Colombian ecosystems. |
Pérez-Escobar, O.A., Cámara-Leret, R., Antonelli, A., Bateman, R., Bellot, S., Chomicki, G., Cleef, A., Diazgranados, M., Dodsworth, S., Jaramillo, C., Madriñan, S., Olivares, I., Zuluaga, A., Bernal, R. |
Neotropics |
Science |
Overview article |
2018 |
Link |
Antonelli, A. |
Teasing apart mountain uplift, climate change and biotic drivers of species diversification. |
Condamine, F.L., Antonelli, A., Lagomarsino, L.P., Hoorn, C., Liow, L.H. |
Methods and Tools, Biogeography, Animals, Neotropics |
Mountains, Climate and Biodiversity |
Book chapter |
2018 |
Link |
Antonelli, A. |
The road to evolutionary success: insights from the demographichistory of an Amazonian palm. |
Melo, W.A., Freitas, C.G., Bacon, C.D., Collevatti, R.G. |
Plants, Biogeography, Systematics, Neotropics |
Heredity |
Research article |
2018 |
Link |
Bacon, C.D. |
Ytre Hvaler nasjonalpark |
Stronen, A.V., Iacolina, L., Pertoldi, C., Kusza, S., Hulva, P., Dykyy, I., Kojola, I., Faurby, S. |
Animals, Methods and Tools, Systematics |
Conservation Genetics Resources |
Research article |
2018 |
Link |
Faurby, S. |
The impact of early Quaternary climate change on the diversification and population dynamics of a South American cactus species. |
Silva, G.A.R., Antonelli, A., Lendel A., Moraes, E.M., Manfrin, M.H. |
Biogeography, Plants, Neotropics, Systematics |
Journal of Biogeography |
Research article |
2018 |
Link |
Antonelli, A. |
Mountains, Climate and Biodiversity. |
Hoorn, C., Perrigo, A., Antonelli, A. |
Biogeography, Global, Animals, Plants, Palaeontology, Methods and Tools |
Wiley |
Book |
2018 |
Link |
Perrigo, A., Antonelli, A. |
The science and ethics of extinction. |
Antonelli, A., Perrigo, A. |
Global |
Nature Ecology and Evolution |
Overview article |
2018 |
Link |
Antonelli, A., Perrigo, A. |
Mountains of diversity. |
Zizka, A., Antonelli, A. |
Global, Biogeography, Animals |
Nature |
Overview article |
2018 |
Link |
Antonelli, A. |
The pitfalls of taking science to the public. |
Antonelli, A., Perrigo, A. |
Global |
Science |
Overview article |
2018 |
Link |
Antonelli, A., Perrigo, A. |
Anthropogenic range contractions bias species climate change forecasts. |
Faurby, S., Araújo, M.B. |
Methods and Tools, Animals, Global |
Nature Climate Change |
Research article |
2018 |
Link |
Faurby, S. |
The impact of endothermy on the climatic niche evolution and the distribution of vertebrate diversity. |
Rolland, J., Silvestro, D., Schluter, D., Guisan, A., Broennimann, O., Salamin, N. |
Biogeography, Animals, Global |
Nature Ecology and Evolution |
Research article |
2018 |
Link |
Silvestro, D. |
Allele phasing is critical to revealing a shared allopolyploid origin of Medicago arborea and M. strasseri (Fabaceae). |
Eriksson, J.S., de Sousa, F., Bertrand, Y.J.K., Antonelli, A., Oxelman, B., Pfeil, B.E. |
Plants, Systematics, Methods and Tools, Temperate zone |
BMC Evolutionary Biology |
Research article |
2018 |
Link |
Eriksson, J.S., Antonelli, A. |
Patterns, biases and prospects in the distribution and diversity of Neotropical snakes. |
Guedes, T., Sawaya, R.J., Zizka, A., Laffan, S., Faurby, S., Pyron, R.A., Bérnils, R.S., Jansen, M., Passos, P., Prudente, A.L.C., Cisneros-Heredia, D.F., Braz, H.B., Nogueira, C.C., Antonelli, A. |
Animals, Neotropics, Biogeography |
Global Ecology and Biogeography |
Research article |
2018 |
Link |
Guedes, T., Faurby, S., Antonelli, A. |
Learning from the past to prepare for the future: Felids face continued threat from declining prey richness. |
Sandom, C.J., Faurby, S., Svenning, J.C., Burnham, D., Dickman, A., Hinks, A., Macdonald, E.A., Ripple, B., Williams, J., Macdonald, D. |
Biogeography, Animals |
Ecography |
Research article |
2018 |
Link |
Faurby, S. |
Clownfishes evolution below and above the species level. |
Rolland, J., Silvestro, D., Litsios, G., Faye, L., Salamin, N. |
Biogeography, Animals |
Proceedings of the Royal Society |
Research article |
2018 |
Link |
Silvestro, D. |
An ant genus-group (Prenolepis) illuminates the biogeography and drivers of insect diversification in the Indo-Pacific. |
Matos-Maraví, P., Clouse, R.M., Sarnat, E.M., Economo, E.P., LaPolla, J.S., Borovanska, M., Rabeling, C., Czekanski-Moir, J., Latumahina, F., Wilson, E.O., Janda, M. |
Biogeography, Animals, Palaeotropics |
Molecular Phylogenetics and Evolution |
Research article |
2018 |
Link |
Matos-Maraví, P. |
Evolution of the sabertooth mandible: A deadly ecomorphological specialization. |
Piras, P., Silvestro, D., Carotenuto, F., Castiglione, S., Kotsakis, A., Maiorino, L., Melchionna, M., Mondanaro, A., Sansalone, G., Serio, C., Vero, V.A., Raia, P. |
Biogeography, Animals |
Palaeogeography, Palaeoclimatology, Palaeoecology |
Research article |
2018 |
Link |
Silvestro, D. |
Evolutionary persistence in Gunnera and the contribution of southern plant groups to the tropical Andes biodiversity hotspot. |
Bacon, C.D., Velásquez-Puentes, F.J., Hinojosa, L.F., Schwartz, T., Oxelman, B., Pfeil, B., Arroyo, M.T.K., Wanntorp, L., Antonelli, A. |
Biogeography, Plants, Neotropics, Systematics |
PeerJ |
Research article |
2018 |
Link |
Bacon, C.D., Antonelli, A. |
New species of Mongrel Frogs (Pyxicephalidae: Nothophryne) for northern Mozambique inselbergs. |
Conradie, W., Bittencourt-Silva, G.B., Farooq, H., Loader, S.P., Menegon, M., Tolley, K.A. |
Systematics, Animals, Africa |
African Journal of Herpetology |
Research article |
2018 |
Link |
Farooq, H. |
A roadmap for global synthesis of the plant tree of life |
Eiserhardt, W.L., Antonelli, A., Bennett, D.J., Botigué, L.R., Burleigh, J.G., Dodsworth, S., Enquist, B.J., Forest, F., Kim, J.T., Kozlov, A.M., Leitch, I.J., Maitner, B.S., Mirarab, S., Piel, W.H., Pérez‐Escobar, O.A., Pokorny, L., Rahbek, C., Sandel, B., Smith, S.A., Stamatakis, A., Vos, R.A., Warnow, T., Baker, W.J. |
Systematics, Methods and Tools |
American journal of botany |
Research article |
2018 |
Link |
Antonelli, A., Bennett, D.J. |
We must protect biodiversity. |
Antonelli, A., Perrigo, A. |
Global |
Washington Post |
Popular science |
2017 |
Link |
Antonelli, A., Perrigo, A. |
Prehistoric and historic baselines for trophic rewilding in the Neotropics. |
Svenning, J.C., Faurby, S. |
Animals, Neotropics, Ecology |
Perspectives in Ecology and Conservation |
Research article |
2017 |
Link |
Faurby, S. |
Frugivory-related traits promote speciation of tropical palms. |
Onstein, R.E., Baker, W.J., Couvreur, T.L.P., Faurby, S., Svenning, J.C. |
Neotropics, Plants, Ecology |
Nature Ecology and Evolution |
Research article |
2017 |
Link |
Faurby, S. |
Description of a new flat gecko (Squamata: Gekkonidae: Afroedura) from Mount Gorongosa, Mozambique. |
Branch, W.R., Guyton, J.A., Schmitz, A., Barej, M.F., Naskrecki, P., Farooq, H., Verburgt, L., Rödel, M.O. |
Animals, Africa, Systematics |
Zootaxa |
Research article |
2017 |
Link |
Farooq, H. |
Comparative biogeography, big data, and common myths. |
Antonelli, A. |
Biogeography, Methods and Tools, Global |
Tropical Plant Collections: Legacies from the Past? Essential Tools for the Future? |
Book chapter |
2017 |
PDF |
Antonelli, A. |
Historical Biogeography of endemic seed plant genera in the Caribbean: did GAARlandia play a role? |
Nieto Blázquez, M.E., Antonelli, A., Roncal, J. |
Plants, Neotropics, Biogeography |
Ecology and Evolution |
Research article |
2017 |
Link |
Antonelli, A. |
Jagten på Kinabarken til behandling av malaria. |
Rønsted, N., Antonelli, A., Maldonado, C., Hansen, S.H. |
Neotropics, Plants, Systematics, Biogeography |
Aktuel Naturvidenskab |
Popular science |
2017 |
Link |
Antonelli, A. |
First record of Chomelia triflora (J.H. Kirkbr.) Delprete & Achille (Rubiaceae) from Brazil. |
Pessoa, M.C.R., Persson, C., Antonelli, A., Barbosa, M.R.V. |
Systematics, Plants, Neotropics |
Check List |
Research article |
2017 |
Link |
Antonelli, A. |
Comment (1) on “Formation of the Isthmus of Panama” by O’Dea et al. |
Jaramillo, C., Montes, C., Cardona, A., Silvestro, D., Antonelli, A., Bacon, C.D. |
Biogeography, Neotropics, Animals, Plants, Palaeontology |
Science Advances |
Research article |
2017 |
Link |
Silvestro, D., Antonelli, A., Bacon, C.D. |
Environmentally driven extinction and opportunistic origination explain fern diversification patterns. |
Lehtonen, S., Silvestro, D., Karger, D.N., Scotese, C., Tuomisto, H., Kessler, M., Peña, C., Wahlberg, N., Antonelli, A. |
Plants, Global, Palaeontology, Biogeography |
Nature Scientific Reports |
Research article |
2017 |
Link |
Silvestro, D., Antonelli, A. |
The Pliocene marine megafauna extinction and its impact on functional diversity. |
Pimiento, C., Griffin, J.N., Clements, C.F., Silvestro, D., Varela, S., Uhen, M.D., Jaramillo, C. |
Animals, Neotropics, Biogeography |
Nature Ecology and Evolution |
Research article |
2017 |
Link |
Silvestro, D. |
Lectotypification of Pentagonia macrophylla (Rubiaceae) revisited. |
Rova, J., Persson, C., Ljungstrand, E., Antonelli, A. |
Systematics, Plants, Neotropics |
Phytotaxa |
Research article |
2017 |
Link |
Antonelli, A. |
Fundamental species traits explain provisioning services of tropical American palms. |
Cámara-Leret, R., Faurby, S., Macía, M. J., Balslev, H., Göldel, B., Svenning, J.C., Kissling, W. D., Rønsted, N., Saslis-Lagoudakis, C. H. |
Neotropics, Plants, Ecology |
Nature Plants |
Research article |
2017 |
Link |
Faurby, S. |
Shallow size-density relations within mammal clades suggest greater intra-guild ecological impact of large-bodied species. |
Pedersen, R.Ø., Faurby, S., Svenning, J.-C. |
Animals, Ecology, Biogeography |
Journal of Animal Ecology |
Research article |
2017 |
Link |
Faurby, S. |
Large-scale phylogenetic analysis of Amorphophallus (Araceae) derived from nuclear and plastid sequences reveals new subgeneric delineation. |
Claudel, C., Buerki, S., Chatrou, L.W., Antonelli, A., Alvarez, N., Hetterscheid, W. |
Plants, Systematics, Palaeotropics |
Botanical Journal of the Linnean Society |
Research article |
2017 |
Link |
Antonelli, A. |
Two new species of Pavonia (Malvoideae, Malvaceae) from southern Bahia, Brazil. |
Gonçalez, V.M., Pfeil, B.E., Antonelli, A., Duarte, M.C. |
Systematics, Plants, Neotropics |
Phytotaxa |
Research article |
2017 |
Link |
Antonelli, A. |
Drivers of bioregionalisation. |
Antonelli, A. |
Biogeography, Global |
Nature Ecology and Evolution |
Overview article |
2017 |
Link |
Antonelli, A. |
Towards a Self-Updating Platform for Estimating Rates of Speciation and Migration, Ages, and Relationships of Taxa. |
Antonelli, A., Hettling, H., Condamine, F.L., Vos, K., Nilsson, R. H., Sanderson, J., Sauquet, H., Scharn, R., Silvestro, D., Töpel, M., Bacon, C.D., Oxelman, B., Vos, R. A. |
Methods and Tools, Biogeography, Systematics |
Systematic Biology |
Research article |
2017 |
Link |
Antonelli, A., Silvestro, D., Bacon, C.D. |
Recent origin of Neotropical orchids in the world’s richest plant biodiversity hotspot. |
Perez-Escobar, O.A., Chomicki, G., Condamine, F.L., Karremans, A.P., Bogarin, D., Matzke, N., Silvestro, D., Antonelli, A. |
Neotropics, Plants, Biogeography, Systematics |
New Phytologist |
Research article |
2017 |
Link |
Silvestro, D., Antonelli, A. |
Environmental Impact Statement of biodiversity: Challenges and prospects in biologically diverse environments in Brazilian Amazonia. |
Duarte Ritter, C., McGrate, G., Nilsson, R.H., Fearnside, P.M., Palme, U., Antonelli, A. |
Neotropics, Animals, Plants, Fungi, Microorganisms, Methods and Tools |
Biological Conservation |
Research article |
2017 |
Link |
Antonelli, A. |
Estimating Age-Dependent Extinction: Contrasting Evidence from Fossils and Phylogenies. |
Hagen, O., Andermann, T., Quental, T.B., Antonelli, A., Silvestro, D. |
Methods and Tools, Biogeography, Palaeontology |
Systematic Biology |
Research article |
2017 |
Link |
Hagen, O., Andermann, T., Antonelli, A., Silvestro, D. |
Endemic palm species shed light on habitat shifts and the assembly of the Cerrado and Restinga floras. |
Bacon, C.D., Moraes, M., Jaramillo, C., Antonelli, A. |
Systematics, Biogeography, Neotropics, Plants |
Molecular Phylogenetics and Evolution |
Research article |
2017 |
Link |
Bacon, C.D., Antonelli, A. |
SpeciesGeoCoder: Fast categorization of species occurrences for analyses of biodiversity, biogeography, ecology and evolution. |
Töpel, M., Zizka, A., Calió, M.F., Scharn, R., Silvestro, D., Antonelli, A. |
Methods and Tools, Biogeography |
Systematic Biology |
Research article |
2017 |
Link |
Silvestro, D., Antonelli, A. |
Molecular phylogeny, character evolution and historical biogeography of Cryptanthus Otto & A. Dietr. (Bromeliaceae). |
Cruz, G.A.S., Zizka, G., Silvestro, D., Leme, E.M.C., Schulte, K., Benko-Iseppon, A.M. |
Plants, Systematics, Biogeography |
Molecular Phylogenetics and Evolution |
Research article |
2017 |
Link |
Silvestro, D. |
Cinchona anderssonii (Rubiaceae), a new overlooked species from Bolivia. |
Maldonado, C., Persson, C., Alban, J., Antonelli, A., Rønsted, N. |
Systematics, Neotropics, Plants |
PhytoTaxa |
Research article |
2017 |
Link |
Antonelli, A. |
Phylogeny Predicts the Quantity of Antimalarial Alkaloids Within the Iconic Yellow Cinchona Bark (Rubiaceae: Cinchona calisaya). |
Maldonado, C., Barnes, C.J., Cornett, C., Holmfred, E., Hansen, S.H., Persson, C., Antonelli, A., Rønsted, N. |
Systematics, Neotropics, Biogeography, Plants |
Frontiers in Plant Science |
Research article |
2017 |
Link |
Antonelli, A. |
Infomap Bioregions: Interactive mapping of biogeographical regions from species distributions |
Edler, D., Guedes, T., Zizka, A., Rosvall, M., Antonelli, A. |
Methods and Tools, Biogeography |
Systematic Biology |
Research article |
2017 |
Link |
Edler, D., Guedes, T., Antonelli, A. |
Cities: factor in biological impact. |
Antonelli, A., Perrigo, A. |
Global |
Nature |
Overview article |
2016 |
Link |
Antonelli, A., Perrigo, A. |
Finding needles in the haystack: Where to look for rare species in the American tropics? |
Zizka, A., ter Steege, H., Pessoa, M.C.R., Antonelli, A. |
Plants, Neotropics, Biogeography |
Ecography |
Research article |
2016 |
Link |
Antonelli, A. |
Bayesian estimation of multiple clade competition from fossil data. |
Silvestro, D., Pires, M.M., Quental, T.B., Salamin, N. |
Palaeontology, Methods and Tools |
Evolutionary Ecology Research |
Research article |
2016 |
PDF |
Silvestro, D. |
Tracing the Evolution and Economic Potential of Konjac Glucomannan in Amorphophallus species (Araceae) using Molecular Phylogeny and RAPD Markers. |
Mekkerdchoo, O., chaleeda Borompichaichartkul, C., Perrigo, A.L., Srzednicki, G., Prakitchaiwattana, C., Antonelli, A. |
Plants, Palaeotropics, Systematics, Methods and Tools |
Phytotaxa |
Research article |
2016 |
Link |
Perrigo, A., Antonelli, A. |
The Neogene rise of the tropical Andes facilitated diversification of wax palms (Ceroxylon: Arecaceae) through geographical colonization and climatic niche separation. |
Sanín, M. J., Kissling, W.D., Bacon, C.D., Borchsenius, F., Galeano, G., Svenning, J., Olivera, J., Ramírez, R., Trénel, P., Pintaud, J. |
Biogeography, Plants, Neotropics, Systematics |
Botanical Journal of the Linnean Society |
Research article |
2016 |
Link |
Bacon, C.D. |
Exploring palm-insect interactions across geographic and environmental gradients. |
Restrepo Correa, Z., Nunez Avellanada, L.A., Gonzalez-Caro, S., Velasquez-Puentes, F., Bacon, C.D. |
Plants, Neotropics, Biogeography |
Botanical Journal of the Linnean Society |
Research article |
2016 |
Link |
Bacon, C.D. |
Progress to extinction: increased specialisation causes the demise of animal clades. |
Raia, P., Carotenuto, F., Mondanaro, A., Castiglione, S., Passaro, F., Saggese, F., Melchionna, M., Serio, C., Alessio, L., Silvestro, D., Fortelius, M. |
Palaeontology, Animals, Methods and Tools |
Nature Scientific Reports |
Research article |
2016 |
Link |
Silvestro, D. |
Annotating public fungal ITS sequences from the built environment according to the MIxS-Built Environment standard – a report from a May 23-24, 2016 workshop (Gothenburg, Sweden). |
Abarenkov, K., Adams, R.I., Irinyi, L., Agan, A., Ambrosio, E., Antonelli, A., Bahram, M., Bengtsson-Palme, J., Bok, G., Cangren, P., Coimbra, V., Coleine, C., Gustafsson, C., He, J., Andermann, T., Kristiansson, E., Larsson, E., Larsson, T., Liu, Y., Martinsson, S., Meyer, W., Panova, M., Pombubpa, N., Duarte Ritter, C., Ryberg, M., Svantesson, S., Scharn, R., Svensson, O., Töpel, M., Unterseher, M., Visagie, C., Wurzbacher, C., Taylor, A.F.S., Kõljalg, U., Schriml, L., Nilsson, R.H. |
Fungi, Methods and Tools, Global |
MycoKeys |
Research article |
2016 |
Link |
Antonelli, A., Andermann, T. |
Unexpectedly high beta-diversity of root-associated fungal communities in the Bolivian Andes. |
Barnes, C.J., Maldonado, C., Frøslev, T.G., Antonelli, A., Rønsted, N. |
Fungi, Neotropics, Systematics |
Frontiers in Microbiology |
Research article |
2016 |
Link |
Antonelli, A. |
The discovery of the Amazonian tree flora with an updated checklist of all known tree taxa. |
ter Steege, H., Vaessen, R. W., Cárdenas-López, D., Sabatier, D., Antonelli, A., Mota de Oliveira, S., Pitman, N.C.A., Møller Jørgensen, P., Salomão, R.P. |
Plants, Neotropics, Systematics |
Nature Scientific Reports |
Research article |
2016 |
Link |
Antonelli, A. |
Bridging inter- and intraspecific trait evolution with a hierarchical Bayesian approach. |
Kostikova, A., Silvestro, D., Pearman, P. B., Salamin, N. |
Methods and Tools |
Systematic Biology |
Research article |
2016 |
Link |
Silvestro, D. |
Competition and extinction explain the evolution of diversity in American automobiles. |
Gjesfjeld, E., Chang, J., Silvestro, D., Kelty, C., Alfaro M. E. |
Methods and Tools |
Palgrave Communications |
Research article |
2016 |
Link |
Silvestro, D. |
Tectonic blocks and molecular clocks. |
De Baets, K., Antonelli, A., Donoghue, P. |
Biogeography, Palaeontology, Global, Methods and Tools |
Philosophical Transactions |
Research article |
2016 |
Link |
Antonelli, A. |
Top 50 most wanted fungi. |
Nilsson, R. H., Wurzbacher, C., Bahram, M., Coimbra, V.R.M., Larsson, E., Tedersoo, L., Eriksson, J.S., Duarte Ritter, C., Svantesson, S., Sánchez-García, M., Ryberg, M., Kristiansson, E., Abarenkov, K. |
Fungi, Global |
MycoKeys |
Research article |
2016 |
Link |
Eriksson, J.S. |
Quaternary glaciation and the Great American Biotic Interchange. |
Bacon, C.D., Molnar, P., Antonelli, A., Crawford, A.J., Montes, C., Vallejo-Pareja, M.C. |
Palaeontology, Animals, Plants, Neotropics, Biogeography |
Geology |
Research article |
2016 |
Link |
Bacon, C.D., Antonelli, A. |
The abiotic and biotic drivers of rapid diversification in Andean bellflowers (Campanulaceae). |
Lagomarsino, L.P., Condamine, F.L., Antonelli, A., Mulch, A., Davis, C.C. |
Plants, Biogeography, Methods and Tools, Systematics |
New Phytologist |
Research article |
2016 |
Link |
Antonelli, A. |
Fossil biogeography: a new model to infer dispersal, extinction and sampling from palaeontological data. |
Silvestro, D., Zizka, A., Bacon, C.D., Cascales-Miñana, B., Salamin, N., Antonelli, A. |
Methods and Tools, Biogeography, Palaeontology, Global |
Philosophical Transactions of the Royal Society |
Research article |
2016 |
Link |
Silvestro, D., Bacon, C.D., Antonelli, A. |
Ancient islands acted as refugia and pumps for conifer diversity. |
Condamine, F.L., Leslie, A.B., Antonelli, A. |
Biogeography, Palaeotropics, Plants |
Cladistics |
Research article |
2016 |
Link |
Antonelli, A. |
Intra and interspecific sequence variation in closely related species of Cereus (CACTACEAE) Biochemical Systematics and Ecology 65 137-142. |
Silva, G.A.R., Jojima, C., Moraes, E.M., Antonelli, A., Manfrin, M.H., Franco, F.F. |
Systematics, Plants, Neotropics |
Biochemical Systematics and Ecology |
Research article |
2016 |
Link |
Antonelli, A. |
Biogeography of the Malagasy Celastraceae: Multiple independent origins followed by widespread dispersal of genera from Madagascar. |
Bacon, C.D., Simmons, M.P., Archer, R.H., Zhao, L., Andriantiana, J. |
Biogeography, Africa, Plants |
Molecular Phylogenetics and Evolution |
Research article |
2016 |
Link |
Bacon, C.D. |
Neotropical biogeography: Possible goals and challenges for the next ten years. |
Antonelli, A. |
Neotropics, Biogeography, Plants, Animals |
Biogeografia da América do Sul / Análise de Tempo, Espaço e Forma |
Book chapter |
2016 |
PDF |
Antonelli, A. |
Floristic biogeography of South America. |
Fiaschi, P., Pirani, J. R., Heiden, G., Antonelli, A. |
Neotropics, Biogeography, Plants |
Biogeografia da América do Sul / Análise de Tempo, Espaço e Forma |
Book chapter |
2016 |
PDF |
Antonelli, A. |
Reply to Lessios and Marko et al.: Early and progressive migration across the Isthmus of Panama is robust to missing data and biases. |
Bacon, C.D., Silvestro, D., Jaramillo, C., Smith, B.T., Chakrabarty, P., Antonelli, A. |
Biogeography, Neotropics, Plants, Animals |
Proceedings of the National Academy of Sciences of the USA |
Research article |
2015 |
Link |
Bacon, C.D., Silvestro, D., Antonelli, A. |
Multiple origins of mountain life. |
Antonelli, A. |
Biogeography |
Nature |
Overview article |
2015 |
Link |
Antonelli, A. |
Biological evidence supports an early and complex emergence of the Isthmus of Panama. |
Bacon, C.D., Silvestro, D., Jaramillo, C., Smith, B.T., Chakrabarty, P., Antonelli, A. |
Biogeography, Neotropics, Plants, Animals |
Proceedings of the National Academy of Sciences of the USA |
Research article |
2015 |
Link |
Bacon, C.D., Silvestro, D., Antonelli, A. |
The role of clade competition in the diversification of North American canids. |
Silvestro, D., Antonelli, A., Salamin, N., Quental, T.B. |
Animals, Methods and Tools, Biogeography, Temperate zone |
Proceedings of the National Academy of Sciences of the USA |
Research article |
2015 |
Link |
Silvestro, D., Antonelli, A. |
A network approach for identifying and delimiting biogeographical regions. |
Vilhena, D., Antonelli, A. |
Methods and Tools, Biogeography, Global |
Nature Communications |
Research article |
2015 |
Link |
Antonelli, A. |
An engine for global plant diversity: Highest evolutionary turnover and emigration in the American tropics. |
Antonelli, A., Zizka, A., Silvestro, D., Scharn, R., Cascales-Miñana, B., Bacon, C.D. |
Biogeography, Global, Biogeography |
Frontiers in Genetics |
Research article |
2015 |
Link |
Antonelli, A., Silvestro, D., Bacon, C.D. |
Estimating species diversity and distribution in the era of Big Data: To what extent can we trust public databases? |
Maldonado, C., Molina, C., Zizka, A., Persson, C., Taylor, C., Alban, J., Chilquillo, N., Rønsted, N., Antonelli, A. |
Neotropics, Plants, Methods and Tools |
Global Ecology and Biogeography |
Research article |
2015 |
Link |
Antonelli, A. |
Assessing the impact of phylogenetic incongruence on taxonomy, floral evolution, biogeographical history, and phylogenetic diversity. |
Zhang, Q., Feild, T.S., Antonelli, A. |
Systematics, Plants, Biogeography, Global |
American Journal of Botany |
Research article |
2015 |
Link |
Antonelli, A. |
Traditional plant use in Burkina Faso (West Africa): a national-scale analysis with focus on traditional medicine. |
Zizka, A., Thiombiano, A., Dressler, S., Nacoulma, B.M.I., Ouédraogo, A., Ouédraogo, I., Ouédraogo, O., Zizka, G., Hahn, K., Schmidt, M. |
Plants, Africa |
Journal of Ethnobiology Ethnomedicine |
Research article |
2015 |
Link |
|
Available climate regimes drive niche diversification in grasses during range expansion. |
Wüest, R., Antonelli, A., Zimmermann, N., Linder, H.P. |
Plants, Biogeography, Global |
The American Naturalist |
Research article |
2015 |
Link |
Antonelli, A. |
South American Vegetation Types. |
Fiaschi, P., Heiden, G., Antonelli, A., Pirani, J.R. |
Neotropics |
Figshare |
Overview article |
2015 |
Link |
Antonelli, A. |
Revisiting the origin and diversification of vascular plants through a comprehensive Bayesian analysis of the fossil record. |
Silvestro, D., Cascales-Miñana, B., Bacon, C.D., Antonelli, A. |
Palaeontology, Biogeography, Plants, Global |
New Phytologist |
Research article |
2015 |
Link |
Silvestro, D., Bacon, C.D., Antonelli, A. |
The origin of oranges: a multi-locus phylogeny of Rutaceae subfamily Aurantioideae. |
Schwartz, T., Nylinder, S., Ramadugu, C., Antonelli, A., Pfeil, B.E. |
Systematics, Plants, Global, Biogeography |
Systematic Botany |
Research article |
2015 |
Link |
Antonelli, A. |
Phylogeny, classification, and fruit evolution of the species-rich Neotropical bellflowers (Campanulaceae: Lobelioideae). |
Lagomarsino, L., Antonelli, A., Muchhala, N., Mathews, S., Davis, C. C. |
Systematics, Plants, Neotropics |
American Journal of Botany |
Research article |
2015 |
Link |
Antonelli, A. |
Measurement errors should always be incorporated in phylogenetic comparative analysis. |
Silvestro, D., Kostikova A., Litsios G., Pearman P. B., Salamin N. |
Methods and Tools, Biogeography |
Methods in Ecology and Evolution |
Research article |
2015 |
Link |
Silvestro, D. |
Global diversification of a tropical plant growth form: environmental correlates and historical contingencies in climbing palms. |
Couvreur, T.L.P., Kissling, W.D., Condamine, F.L., Svenning, J-C., Rowe, N.P., Baker, W.J. |
Plants, Biogeography, Global |
Frontiers in Genetics |
Research article |
2015 |
Link |
|
Diversity, natural history, and geographic distribution of snakes in the Caatinga, Northeastern Brazil. |
Guedes, T., Nogueira, C., Marques, O.A.V. |
Biogeography, Animals, Neotropics |
Zootaxa |
Research article |
2014 |
Link |
Guedes, T. |
PyRate: a new program to estimate speciation and extinction rates from incomplete fossil data. |
Silvestro, D., Salamin, N., Schnitzler, J. |
Methods and Tools, Biogeography |
Methods in Ecology and Evolution |
Research article |
2014 |
Link |
Silvestro, D. |
Biogeography, vicariance and conservation of snakes of the neglected and endangered Caatinga region, north-eastern Brazil. |
Guedes, T., Sawaya, R.J., Nogueira, C.C. |
Biogeography, Animals, Neotropics |
Journal of Biogeography |
Research article |
2014 |
Link |
Guedes, T. |
The red island and the seven dwarfs: body size reduction in Cheirogaleidae. |
Masters, J.C., Génin, F., Silvestro, D., Lister, A.M., DelPero, M. |
Animals, Biogeography, Africa |
Journal of Biogeography |
Research article |
2014 |
Link |
Silvestro, D. |
Cretaceous environmental changes led to high extinction rates in a hyperdiverse beetle family. |
Kergoat, G.J., Bouchard, P., Clamens, A., Abbate, J.L., Jourdan, H., Jabbour-Zahab, R., Genson, G., Soldati, L., Condamine, F.L. |
Biogeography, Animals |
BMC Evolutionary Biology |
Research article |
2014 |
Link |
|
Disentangling the influence of climatic and geological changes on species radiations. |
Linder, H.P., Rabosky, D.L., Antonelli, A., Wüest, R.O., Ohlemüller, R. |
Biogeography, Plants, Global |
Journal of Biogeography |
Research article |
2014 |
Link |
Antonelli, A. |
Improving ITS sequence data for identification of plant pathogenic fungi. |
Nilsson, R.H., Hyde, K.D., Pawlowska, J., Ryberg, M., Tedersoo, L., Aas, A.B., Alias, S.A., Alves, A., Anderson, C.L., Antonelli, A., Arnold, A.E., Bahnmann, B., Bahram, M., Bengtsson-Palme, J., Berlin, A., Branco, S., Chomnunti, P., Dissanayake, A., Drenkhan, R., Friberg, H., Frøslev, T.G., Halwachs, B., Hartmann, M., Henricot, B., Jayawardena, R., Jumpponen, A., Kauserud, H., Koskela, S., Kulik, T., Liimatainen, K., Lindahl, B., Lindner, D., Liu, J-K., Maharachchikumbura, S., Manamgoda, D., Martinsson, S., Neves, M.A., Niskanen, T., Nylinder, S., Pereira, O.L., Pinho, D.B., Porter, T.M., Queloz, V., Riit, T., Sanchez-García, M., de Sousa, F., Stefaczyk, E., Tadych, M., Takamatsu, S., Tian, Q., Udayanga, D., Unterseher, M., Wang, Z., Wikee, S., Yan, J., Larsson, E., Larsson, K-H., Kõljalg, U., Abarenkov, K. |
Fungi, Methods and Tools, Global |
Fungal Diversity |
Research article |
2014 |
Link |
Antonelli, A. |
Bayesian Estimation of Speciation and Extinction from Incomplete Fossil Occurrence Data. |
Silvestro, D., Schnitzler, J., Liow, L.H., Antonelli, A., , Salamin, N. |
Methods and Tools, Biogeography |
Systematic Biology |
Research article |
2014 |
Link |
Silvestro, D., Antonelli, A. |
Faster Speciation and Reduced Extinction in the Tropics Contribute to the Mammalian Latitudinal Diversity Gradient. |
Rolland, J., Condamine, F.L., Jiguet, F., Morlon, H. |
Animals, Biogeography, Global |
PLOS Biology |
Research article |
2014 |
Link |
|
Biome evolution and biogeographical change through time. |
Bacon, C.D. |
Biogeography, Neotropics |
Frontiers of Biogeograpy |
Overview article |
2013 |
PDF |
Bacon, C.D. |
A horizon scan of Biogeography. |
Dawson, M.N., Algar, A.C., Antonelli, A., Dávalos, L.M., Davis, E., Early, R., Guisan, A., Jansson, R., Lessard, J-P., Marske, K.A., McGuire, J.L., Stigall, A.L., Swenson, N.G., Zimmermann, N.E., Gavin, D.G. |
Biogeography, Global |
Frontiers of Biogeography |
Overview article |
2013 |
PDF |
Antonelli, A. |
Fine-scale endemism of Amazonian birds in a threatened Landscape. |
Fernandes, A.M. |
Animals, Neotropics, Biogeography |
Biodiversity and Conservation |
Research article |
2013 |
Link |
|
Multilocus phylogeography of the Wedge-billed Woodcreeper Glyphorynchus spirurus (Aves, Furnariidae) in lowland Amazonia: Widespread cryptic diversity and paraphyly reveal a complex diversification pattern. |
Fernandes, A.M., Gonzalez, J., Wink, M., Aleixo, A. |
Animals, Neotropics, Biogeography |
Molecular Phylogenetics and Evolution |
Research article |
2013 |
Link |
|
Geographic and taxonomic disparities in species diversity: dispersal and diversification rates across Wallace's line. |
Bacon, C.D., Michonneau, F., Henderson, A.J., McKenna, M.J., Milroy, A.M., Simmons, M.P. |
Biogeography, Plants, Palaeotropics |
Evolution |
Research article |
2013 |
Link |
Bacon, C.D. |
Biodiversity from Mountain Building. |
Hoorn, C., Mosbrugger, V., Mulch, A., Antonelli, A. |
Palaeontology, Biogeography, Plants, Animals |
Nature Geoscience |
Overview article |
2013 |
Link |
Antonelli, A. |
Evolution of multicellularity coincided with increased diversification of cyanobacteria and the Great Oxidation Event. |
Schirrmeister, B.E., de Vos, J., Antonelli, A., Bagheri, H.C. |
Microorganisms, Global, Biogeography |
Proceedings of the National Academy of Sciences of the USA |
Research article |
2013 |
Link |
Antonelli, A. |
What determines biogeographical ranges? Historical wanderings and ecological constraints in the danthonioid grasses. |
Linder, H.P., Antonelli, A., Pirie, M.D., Humphreys, A.M., Wüest, R.O. |
Plants, Global, Biogeography |
Journal of Biogeography |
Research article |
2013 |
Link |
Antonelli, A. |
Neotropical Plant Evolution: Assembling the Big Picture. |
Hughes, C., Pennington, R.T., Antonelli, A. |
Plants, Neotropics, Biogeography |
Botanical Journal of the Linnean Society |
Research article |
2013 |
Link |
Antonelli, A. |
Chilean Pitavia more closely related to Oceania and Old World Rutaceae than to Neotropical groups: evidence from two cpDNA non-coding regions, with a new subfamilial classification of the family. |
Groppo, M., Kallunki, J.A., Pirani, J.R., Antonelli, A. |
Plants, Global, Systematics |
PhytoKeys |
Research article |
2012 |
Link |
Antonelli, A. |
Phylogeography of the chestnut-tailed antbird (Myrmeciza hemimelaena) clarifies the role of rivers in Amazonian biogeography. |
Fernandes, A.M., Wink, M., Aleixo, A. |
Animals, Neotropics, Biogeography |
Journal of Biogeography |
Research article |
2012 |
Link |
|
Model uncertainty in ancestral area reconstruction: A parsimonious solution? |
Pirie, M. D., Humphreys, A.M., Antonelli, A., Galley, C., Linder, H.P. |
Plants, Temperate zone, Biogeography |
Taxon |
Research article |
2012 |
PDF |
Antonelli, A. |
Past Climate Change and Plant Evolution in Western North America: A Case Study in Rosaceae. |
Töpel, M., Antonelli, A., Yesson, C., Eriksen, B. |
Plants, Temperate zone, Biogeography |
PLoS One |
Research article |
2012 |
Link |
Antonelli, A. |
Suckulenter. |
Petri, A., Antonelli, A. |
Plants |
Göteborgs Botaniska Trädgårds Förlag |
Popular science |
2012 |
PDF |
Antonelli, A. |
Origins of Biodiversity–Response. |
Hoorn, C., Wesselingh, F.P., ter Steege, H., Bermudez, M.A., Mora, J., Sevink, I., Sanmartín, A., Sanchez-Meseguer, C.L., Anderson, J., Figueiredo, C., Jaramillo, D., Riff, F.R., Negri, H., Hooghiemstra, J., Lundberg, T., Stadler, T., Sarkinen, T., Antonelli, A. |
Biogeography, Plants, Animals, Palaeontology, Neotropics |
Science |
Overview article |
2011 |
Link |
Antonelli, A. |
Reconstructing the Spatiotemporal Evolution of the Ancient Angiosperm Genus Hedyosmum (Chloranthaceae) Using Empirical and Simulated Approaches: Mass Extinction, Gradual Cooling, or Rapid Radiation? |
Antonelli, A., Sanmartín, I. |
Systematics, Biogeography, Plants, Global |
Systematic Biology |
Research article |
2011 |
Link |
Antonelli, A. |
Evolution of cyanobacterial morphotypes: Taxa required for improved phylogenomic approaches. |
Schirrmeister, B.E., Anisimova, M., Antonelli, A., Bagheri, H.C. |
Microorganisms, Global |
Communicative and Integrative Biology |
Overview article |
2011 |
Link |
Antonelli, A. |
Revisiting taxonomy, morphological evolution, and fossil calibration strategies in Chloranthaceae. |
Zhang, Q., Antonelli, A., Feild, T.S., Kong, H.-Z. |
Systematics, Biogeography, Plants, Global |
Journal of Systematics and Evolution |
Research article |
2011 |
Link |
Antonelli, A. |
Ecology and evolution of the diaspore ‘burial syndrome’. |
Humphreys, A.M., Antonelli, A., Pirie, M.D., Linder, H.P. |
Plants, Temperate zone |
Evolution |
Research article |
2011 |
Link |
Antonelli, A. |
Why are there so many plant species in the Neotropics? |
Antonelli, A., Sanmartín, I. |
Plants, Animals, Palaeontology, Neotropics, Biogeography |
Taxon |
Research article |
2011 |
PDF |
Antonelli, A. |
Absence of mammals and the evolution of New Zealand grasses. |
Antonelli, A., Humphreys, A.M., Lee, W.G., Linder, H.P. |
Animals, Temperate zone, Plants, Biogeography |
Proceedings of the Royal Society Series B: Biological Sciences |
Research article |
2011 |
Link |
Antonelli, A. |
Estimating the age of fire in the Cape Flora of South Africa from an orchid phylogeny. |
Bytebier, B., Antonelli, A., Bellstedt, D.U., Linder, P. |
Plants, Biogeography, Systematics, Africa |
Proceedings of the Royal Society Series B: Biological Sciences |
Research article |
2011 |
Link |
Antonelli, A. |
The origin of multicellularity in cyanobacteria. |
Schirrmeister, B., Antonelli, A., H. Bagheri. |
Microorganisms, Global |
BMC Evolutionary Biology |
Research article |
2011 |
Link |
Antonelli, A. |
Vicariance or long-distance dispersal: historical biogeography of the pantropical subfamily Chrysophylloideae (Sapotaceae). |
Bartish, I.V., Antonelli, A., Richardson, J.E., Swenson, U. |
Plants, Biogeography, Systematics, Global |
Journal of Biogeography |
Research article |
2011 |
Link |
Antonelli, A. |
Amazonia through time: Andean uplift, climate change, landscape evolution and biodiversity. |
Hoorn, C., Wesselingh, F.P., ter Steege, H., Bermudez, M.A., Mora, A., Sevink, J., Sanmartín, I., Sanchez-Meseguer, A., Anderson, C.L., Figueiredo, J.P., Jaramillo, C., Riff, D., Negri, F.R., Hooghiemstra, H., Lundberg, J., Stadler, T., Sarkinen, T., Antonelli, A. |
Biogeography, Plants, Animals, Palaeontology, Neotropics |
Science |
Research article |
2010 |
Link |
Antonelli, A. |
Climate cooling promoted the expansion and radiation of a threatened group of South American orchids (Epidendroideae:Laeliinae). |
Antonelli, A., Verola, C.F., Parisod, C., Gustafsson, A.L.S. |
Biogeography, Systematics, Plants, Neotropics |
Biological Journal of the Linnean Society |
Research article |
2010 |
Link |
Antonelli, A. |
Reassessing the temporal evolution of orchids with new fossils and a Bayesian relaxed clock, with implications for the diversification of the rare South American genus Hoffmannseggella (Orchidaceae: Epidendroideae). |
Gustafsson, A.L.S., Verola, C.F., Antonelli, A. |
Biogeography, Global, Plants |
BMC Evolutionary Biology |
Research article |
2010 |
Link |
Antonelli, A. |
Molecular studies and phylogeography of Amazonian tetrapods and their relation to geological and climatic models. |
Antonelli, A., Quijada-Masareñas, A., Crawford, A.J., Bates, A.J., Velazco, J.M., Wüster, W. |
Biogeography, Neotropics, Animals |
Amazonia, Landscape and Species Evolution |
Book chapter |
2010 |
Link |
Antonelli, A. |
n the origin of Amazonian landscapes and biodiversity: a synthesis |
Wesselingh, F. P., Hoorn, C., Kroonenberg, S.B., Antonelli, A., Lundberg, J.G., Vonhof, H.B., Hooghiemstra, H. |
Biogeography, Neotropics, Palaeontology, Plants, Animals |
Amazonia, Landscape and Species Evolution |
Book chapter |
2010 |
Link |
Antonelli, A. |
Placement of Kuhlmanniodendron Fiaschi & Groppo in Lindackerieae (Achariaceae, Malpighiales) confirmed by analyses of rbcL sequences, with notes on pollen and wood anatomy. |
Groppo, M., Fiaschi, P., Salatino, M.L.F., Ceccantini, G.T., Santos, F.A.R., Verola, C., Antonelli, A. |
Systematics, Plants, Neotropics |
Plant Systematics and Evolution |
Research article |
2010 |
Link |
Antonelli, A. |
Tracing the impact of the Andean uplift on Neotropical plant evolution. |
Antonelli, A., Nylander, J.A.A., Persson, C., Sanmartín, I. |
Systematics, Biogeography, Plants, Neotropics |
Proceedings of the National Academy of Sciences of the USA |
Research article |
2009 |
Link |
Antonelli, A. |
Have giant lobelias evolved several times independently? Life form shifts and historical biogeography of the cosmopolitan and highly diverse subfamily Lobelioideae (Campanulaceae). |
Antonelli, A. |
Systematics, Plants, Global |
BMC Biology |
Research article |
2009 |
Link |
Antonelli, A. |
Pollination of the Lady’s slipper orchid (Orchidaceae: Cypripedium calceolus) in southern Scandinavia: taxonomic and conservational aspects. |
Antonelli, A., Dahlberg, C.J., Karlgren, K.H.I., Appelqvist, T. |
Ecology, Temperate zone |
Nordic Journal of Botany |
Research article |
2009 |
Link |
Antonelli, A. |
Brazil Should Facilitate Research Permits. |
Antonelli, A., Rodriguez, V. |
Neotropics |
Conservation Biology |
Overview article |
2009 |
Link |
Antonelli, A. |
A phylogenetic approach to detect selection on the target site of the antifouling compound irgarol 1051 in tolerant periphyton communities. |
Eriksson, K.M., Antonelli, A., Clarke, A.K., Blanck, H. |
Microorganisms, Temperate zone |
Environmental Microbiology |
Research article |
2009 |
Link |
Antonelli, A. |
Gaining access to biological material from Brazil. |
Rodriguez, V., Antonelli, A. |
Neotropics, |
Taxon |
Overview article |
2009 |
PDF |
Antonelli, A. |
Higher level phylogeny and evolutionary trends in Campanulaceae subfam.Lobelioideae: Molecular signal overshadows morphology. |
Antonelli, A. |
Systematics, Plants, Global |
Molecular Phylogenetics and Evolution |
Research article |
2008 |
Link |
Antonelli, A. |
The Peniophorella praetermissa species complex (Basidiomycota). |
Hallenberg, N., Nilsson, H.R., Antonelli, A., Wu, S.H., Maekawa, N., Nordén, B. |
Systematics, Fungi, Global |
Mycological Research |
Research article |
2007 |
Link |
Antonelli, A. |
Biosystematic studies in Brazilian endemic genus Hoffmannseggella H.G.Jones (Orchidaceae: Laeliinae): a multiple approach applied to conservation. |
Antonelli, A. |
Systematics, Plants, Neotropics |
Lankesteriana |
Research article |
2007 |
Link |
Antonelli, A. |
Phylogeny of the tribe Cinchoneae (Rubiaceae), its position in Cinchonoideae, and description of a new genus, Ciliosemina. |
Andersson, L., Antonelli, A. |
Systematics, Plants, Neotropics |
Taxon |
Research article |
2005 |
PDF |
Antonelli, A. |
Anthropogenic extinctions conceal widespread evolution of flightlessness in birds. |
Sayol, F., Steinbauer, M.J., Blackburn, T.M., Antonelli, A., Faurby, S. |
Animals |
Science Advances |
Research article |
2020 |
Link |
Faurby, S., Antonelli, A. |
Taxonomic revision of the genus Xenopholis Peters, 1869 (Serpentes: Dipsadidae): Integrating morphology with ecological niche. |
Gomes, D.F., Azevedo, J., Murta-Fonseca, R., Faurby, S., Antonelli, A., Passo, P. |
Systematics, Animals, Ecology |
PLOS ONE |
Research article |
2020 |
Link |
Azevedo, J., Faurby, S., Antonelli, A. |
Ten golden rules for reforestation to optimize carbon sequestration, biodiversity recovery and livelihood benefits. |
Di Sacco, A., Hardwick, K., Blakesley, D., Brancalion, P.H.S., Breman, E., Cecilio Rebola, L., Chomba, S., Dixon, K., Elliott, S., Ruyonga, G., Shaw, K., Smith, P., Smith, R.J., Antonelli, A. |
Restoration, Plants |
Global Change Biology |
Research article |
2021 |
Link |
Smith, R.J., Antonelli, A. |
Fossil data support a pre-Cretaceous origin of flowering plants. |
Silvestro, D., Bacon, C.D., Ding, W., Zhang, Q., Donoghue, P.C.J., Antonelli, A., Xing, Y. |
Plants, Palaeontology |
Nature Ecology and Evolution |
Research article |
2021 |
Link |
Silvestro, D., Bacon, C.D., Antonelli, A. |
Botanical monography in the Anthropocene. |
Grace, O.M., Pérez-Escobar, O.A., Lucas, E.J., Vorontsova, M.S., Lewis, G.P., Walker, B.E., Lohmann, Lúcia G., Knapp, S., Wilkie, P., Sarkinen, T., Darbyshire, I., Nic Lughadha, E., Monro, A., Woudstra, Y., Demissew, S., Muasya, A. M., Díaz, S., Baker, W.J., Antonelli, A. |
Systematics, Plants |
Trends in Plant Science |
Overview article |
2021 |
Link |
Pérez-Escobar, O.A., Antonelli, A. |
Assessing biotic and abiotic interactions of microorganisms in Amazonia through co-occurrence networks and DNA metabarcoding. |
Duarte Ritter, C., Forster, D., Azevedo, J.A.R., Antonelli, A., Nilsson, R.H., Trujillo, M.E., Dunthorn, M. |
Microorganisms |
Microbial Ecology |
Research article |
2021 |
Link |
Azevedo, J.A.R., Antonelli, A., |
Small-world dynamics drove Phanerozoic divergence of burrowing behaviors. |
Baucon, A., de Carvalho, C.N., Felletti, F., Tosadori, G., Antonelli, A. |
Animals, Palaeontology |
Geology |
Research article |
2021 |
Link |
Antonelli, A. |
Contrasting patterns of phylogenetic turnover in amphibians and reptiles are driven by environment and geography in Neotropical savannahs. |
Azevedo, J.A.R., de C. Nogueira, C., Antonelli, A., Faurby, S. |
Animals, Biogeography, Phylogenetics |
Journal of Biogeography |
Research article |
2021 |
Link |
Azevedo, J.A.R., Antonelli, A., Faurby, S. |
Decreased soil moisture due to warming drives phylogenetic diversity and community transitions in the tundra. |
Scharn, R., Little, C.J., Bacon, C.D., Alatalo, J.M., Antonelli, A., Björkman, M.P., Molau, U., Nilsson, H., Björk, R.G. |
Plants, Climate, Phylogenetics |
Environmental Research Letters |
Research article |
2021 |
Link |
Bacon, C.D., Antonelli, A. |
Genomic and niche divergence in an Amazonian palm complex. |
Bacon, C.D., Roncal, J., Andermann, T., Barnes, C.J., Balsev, H., Gutiérrez-Pinto, N., Morales, H., Núñez-Avelleneda, L.A., Tunarosa, N., Antonelli, A. |
Plants, Phyogenomics |
Biological Journal of the Linnean Society |
Research article |
2021 |
Link |
Bacon, C.D., Andermann, T., Antonelli, A. |
Gene count from target sequence capture places three whole genome duplication events in Hibiscus L. (Malvaceae). |
Eriksson, J.S., Bacon, C.D., Bennett, D.J., Pfeil, B. E., Oxelman, B., Antonelli, A. |
Plants, Phylogenomics |
BMC Ecology and Evolution |
Research article |
2021 |
Link |
Bacon, C.D., Antonelli, A. |
Molecular clocks and archaeogenomics of a Late Period Egyptian date palm leaf reveal introgression from wild relatives and add timestamps on the domestication. |
Pérez-Escobar, O.A., Bellott, S., Przelomska, N.A.S., Flowers, J.M., Nesbitt, M., Ryan, P., Gutaker, R.M., Gros-Balthazard, M., Wells, T., Kuhnhäuser, B.G., Schley, R., Bogarin, D., Dodsworth, S., Diaz, R., Lehmann, M., Petoe, P., Eiserhardt, W.L., Preick, M., Hofreiter, M., Hajdas, I., Purugganan, M., Antonelli, A., Gravendeel, B., Leitch, I.J., Torres Jimenez, M.F., Papadopulos, A.S.T., Chomicki, G., Renner, S.S., Baker, W.J. |
Plants, Phylogenomics |
Molecular Biology and Evolution |
Research article |
2021 |
Link |
Pérez-Escobar, O.A., Przelomska, N.A.S., Antonelli, A., Torres Jimenez, M.F., |
Settling a family feud: a high-level phylogenomic framework for the Gentianales based on 353 nuclear genes and partial plastomes. |
Antonelli, A., Clarkson, J.J., Kainulainen, K., Maurin, O., Brewer, G.E., Davis, A.P., Epitawalage, N., Livshultz, T., Persson, C., Pokorny, L., Straub, S.C.K., Struwe, L., Zuntini, A.R., Forest, F., Baker, W.J. |
Plants, Phylogenomics |
American Journal of Botany |
Research article |
2021 |
Link |
Antonelli, A. |
Uses and benefits of digital sequence information from plant genetic resources: lessons learnt from botanical collections. |
Cowell, C., Paton, A., Borrell, J.S., Williams, C., Wilkin, P., Antonelli, A., Baker, W.J., Buggs, R., Fay, M.F., Gargiulo, R., Grace, O.M., Kuhnhäuser, B.G., Woudstra, Y., Kersey, P.J. |
Plants |
Plants People Planet |
Overview article |
2021 |
Link |
Antonelli, A. |
Bio-Dem, a tool to explore the relationship between biodiversity data availability and socio-political conditions in time and space. |
Zizka, A., Rydén, O., Edler, D., Klein, J., Perrigo, A., Silvestro, D., Jagers, S.C., Lindberg, S.I., Antonelli, A. |
Methods and Tools, Global |
Journal of Biogeography |
Research article |
2021 |
Link |
Edler, D., Perrigo, A., Antonelli, A. |
The rise and fall of Neotropical biodiversity. |
Antonelli, A. |
Plants, Neotropics |
Botanical Journal of the Linnean Society |
Overview article |
2021 |
Link |
Antonelli, A. |
Kew declaration on reforestation for biodiversity, carbon capture and livelihoods. |
The Declaration Drafting Committee. |
Plants, Restoration |
Plants People Planet |
Overview article |
2021 |
Link |
Antonelli, A. |
A bioinformatic platform to integrate target capture and whole genome sequences of various read depths for phylogenomics. |
Ribeiro, P.G., Torres Jiménez, M.F., Andermann, T., Antonelli, A., Bacon, C.D., Matos-Maraví, P. |
Methods and Tools, Phylogenomics |
Molecular Ecology |
Research article |
2021 |
Link |
Torres Jiménez, M.F., Andermann, T., Antonelli, A., Bacon, C.D., Matos‐Maraví, P. |
Loss of functional diversity through anthropogenic extinctions of island birds is not offset by biotic invasions. |
Sayol, F., Cooke, R.S.C., Pigot, A.L., Blackburn, T.M., Tobias, J.A., Steinbauer, M.J., Antonelli, A., Faurby, S. |
Animals |
Science Advances |
Research article |
2021 |
Link |
Sayol, F., Cooke, R.S.C., Antonelli, A., Faurby, S. |
Touch me carefully: a step towards understanding morphological diversity in the South American spiny sunflowers (Compositae, Barnadesioideae) |
Ferreira, P.L., Antonelli, A., Groppo, M. |
Systematics, Plants |
Phytotaxa |
Research article |
2021 |
Link |
Ferreira, P.L., Antonelli, A. |
Protecting and sustainably using the world’s plants and fungi. |
Antonelli, A., Hiscock, S., Lennon, S., Simmonds, M., Smith, R.J., Young, B. |
Plants, Conservation |
Plants People Planet |
Overview article |
2020 |
Link |
Antonelli, A., Smith, R.J. |
Unlocking the properties of plants and fungi for sustainable development. |
Antonelli, A., Smith, R.J., Simmonds, M.S.J. |
Plants |
Nature Plants |
Overview article |
2019 |
Link |
Antonelli, A., Smith, R.J. |